Automated Quantification of Pathological Fluids in Neovascular Age-Related Macular Degeneration, and Its Repeatability Using Deep Learning.

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License: CC BY-NC-ND 4.0
Serval ID
serval:BIB_E7CF1BEDCCB0
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Automated Quantification of Pathological Fluids in Neovascular Age-Related Macular Degeneration, and Its Repeatability Using Deep Learning.
Journal
Translational vision science & technology
Author(s)
Mantel I., Mosinska A., Bergin C., Polito M.S., Guidotti J., Apostolopoulos S., Ciller C., De Zanet S.
ISSN
2164-2591 (Electronic)
ISSN-L
2164-2591
Publication state
Published
Issued date
01/04/2021
Peer-reviewed
Oui
Volume
10
Number
4
Pages
17
Language
english
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Abstract
To develop a reliable algorithm for the automated identification, localization, and volume measurement of exudative manifestations in neovascular age-related macular degeneration (nAMD), including intraretinal (IRF), subretinal fluid (SRF), and pigment epithelium detachment (PED), using a deep-learning approach.
One hundred seven spectral domain optical coherence tomography (OCT) cube volumes were extracted from nAMD eyes. Manual annotation of IRF, SRF, and PED was performed. Ninety-two OCT volumes served as training and validation set, and 15 OCT volumes from different patients as test set. The performance of our fluid segmentation method was quantified by means of pixel-wise metrics and volume correlations and compared to other methods. Repeatability was tested on 42 other eyes with five OCT volume scans acquired on the same day.
The fully automated algorithm achieved good performance for the detection of IRF, SRF, and PED. The area under the curve for detection, sensitivity, and specificity was 0.97, 0.95, and 0.99, respectively. The correlation coefficients for the fluid volumes were 0.99, 0.99, and 0.91, respectively. The Dice score was 0.73, 0.67, and 0.82, respectively. For the largest volume quartiles the Dice scores were >0.90. Including retinal layer segmentation contributed positively to the performance. The repeatability of volume prediction showed a standard deviations of 4.0 nL, 3.5 nL, and 20.0 nL for IRF, SRF, and PED, respectively.
The deep-learning algorithm can simultaneously acquire a high level of performance for the identification and volume measurements of IRF, SRF, and PED in nAMD, providing accurate and repeatable predictions. Including layer segmentation during training and squeeze-excite block in the network architecture were shown to boost the performance.
Potential applications include measurements of specific fluid compartments with high reproducibility, assistance in treatment decisions, and the diagnostic or scientific evaluation of relevant subgroups.
Keywords
Angiogenesis Inhibitors/therapeutic use, Deep Learning, Humans, Macular Degeneration/drug therapy, Ranibizumab/therapeutic use, Reproducibility of Results, Visual Acuity
Pubmed
Web of science
Open Access
Yes
Create date
25/05/2021 9:39
Last modification date
25/02/2023 7:46
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