Development and evaluation of an artificial intelligence for bacterial growth monitoring in clinical bacteriology.

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Version: Final published version
License: CC BY 4.0
Serval ID
serval:BIB_CA319F0D5E34
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Development and evaluation of an artificial intelligence for bacterial growth monitoring in clinical bacteriology.
Journal
Journal of clinical microbiology
Author(s)
Jacot D., Gizha S., Orny C., Fernandes M., Tricoli C., Marcelpoil R., Prod'hom G., Volle J-M, Greub G., Croxatto A.
ISSN
1098-660X (Electronic)
ISSN-L
0095-1137
Publication state
Published
Issued date
08/05/2024
Peer-reviewed
Oui
Volume
62
Number
5
Pages
e0165123
Language
english
Notes
Publication types: Journal Article ; Evaluation Study ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Abstract
In clinical bacteriology laboratories, reading and processing of sterile plates remain a significant part of the routine workload (30%-40% of the plates). Here, an algorithm was developed for bacterial growth detection starting with any type of specimens and using the most common media in bacteriology. The growth prediction performance of the algorithm for automatic processing of sterile plates was evaluated not only at 18-24 h and 48 h but also at earlier timepoints toward the development of an early growth monitoring system. A total of 3,844 plates inoculated with representative clinical specimens were used. The plates were imaged 15 times, and two different microbiologists read the images randomly and independently, creating 99,944 human ground truths. The algorithm was able, at 48 h, to discriminate growth from no growth with a sensitivity of 99.80% (five false-negative [FN] plates out of 3,844) and a specificity of 91.97%. At 24 h, sensitivity and specificity reached 99.08% and 93.37%, respectively. Interestingly, during human truth reading, growth was reported as early as 4 h, while at 6 h, half of the positive plates were already showing some growth. In this context, automated early growth monitoring in case of normally sterile samples is envisioned to provide added value to the microbiologists, enabling them to prioritize reading and to communicate early detection of bacterial growth to the clinicians.
Keywords
Humans, Bacteria/growth & development, Bacteria/isolation & purification, Bacteria/classification, Artificial Intelligence, Sensitivity and Specificity, Algorithms, Bacteriological Techniques/methods, Image Processing, Computer-Assisted/methods, Bacterial Infections/diagnosis, Bacterial Infections/microbiology, Bacteriology, Automation, Laboratory/methods, Culture Media/chemistry, artificial intelligence, bacteriology, growth monitoring, sterile plates
Pubmed
Web of science
Open Access
Yes
Create date
08/04/2024 13:16
Last modification date
09/08/2024 15:06
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