Climbing into their Skin to Understand Contextual Protein-Protein Associations and Localizations: Functional Investigations in Transgenic Live Model Organisms.

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State: Public
Version: Final published version
License: CC BY-NC-ND 4.0
Serval ID
serval:BIB_0739F71EFEB9
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Climbing into their Skin to Understand Contextual Protein-Protein Associations and Localizations: Functional Investigations in Transgenic Live Model Organisms.
Journal
Chembiochem
Author(s)
Long MJC, Aye Y.
ISSN
1439-7633 (Electronic)
ISSN-L
1439-4227
Publication state
Published
Issued date
16/04/2024
Peer-reviewed
Oui
Volume
25
Number
8
Pages
e202400005
Language
english
Notes
Publication types: Journal Article ; Review
Publication Status: ppublish
Abstract
Borrowing some quotes from Harper Lee's novel "To Kill A Mockingbird" to help frame our manuscript, we discuss methods to profile local proteomes. We initially focus on chemical biology regimens that function in live organisms and use reactive biotin species for this purpose. We then consider ways to add new dimensions to these experimental regimens, principally by releasing less reactive (i. e., more selective) (preter)natural electrophiles. Although electrophile release methods may have lower resolution and label fewer proteins than biotinylation methods, their ability to probe simultaneously protein function and locale raises new and interesting possibilities for the field.
Keywords
Biotin, Proteome, Biotinylation, APEX, Bio-ID and variants, Electrophile signaling, Function-guided spatial-proteomics, Protein-protein interactions, Proximity/interactome mapping tools, REX-technologies
Pubmed
Web of science
Open Access
Yes
Create date
25/03/2024 11:56
Last modification date
23/04/2024 7:08
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