T-cell repertoire analysis and metrics of diversity and clonality.
Détails
Télécharger: Review_TCR_JChiffelle.pdf (1767.56 [Ko])
Etat: Public
Version: Final published version
Licence: Non spécifiée
Etat: Public
Version: Final published version
Licence: Non spécifiée
ID Serval
serval:BIB_598F3EDCA20B
Type
Article: article d'un périodique ou d'un magazine.
Sous-type
Synthèse (review): revue aussi complète que possible des connaissances sur un sujet, rédigée à partir de l'analyse exhaustive des travaux publiés.
Collection
Publications
Institution
Titre
T-cell repertoire analysis and metrics of diversity and clonality.
Périodique
Current opinion in biotechnology
ISSN
1879-0429 (Electronic)
ISSN-L
0958-1669
Statut éditorial
Publié
Date de publication
10/2020
Peer-reviewed
Oui
Volume
65
Pages
284-295
Langue
anglais
Notes
Publication types: Journal Article ; Review
Publication Status: ppublish
Publication Status: ppublish
Résumé
The recent developments of high-throughput bulk and single-cell sequencing technologies accelerated the understanding of the complexity of immune repertoire dynamics combined to transcriptomics. Also, profiling of cellular repertoires in health or disease requires statistical metrics to capture clonal diversity characterized by clones frequency, repertoire richness and convergence. Here we present the common technologies of bulk and single-cell sequencing of T-cell receptors (TCRs), discuss current knowledge regarding computational tools clustering and predicting specificity of TCR repertoires based on shared structural motifs and review main indices for repertoire diversity and convergence analyses. These tools represent potential biomarkers to decipher the fitness of immune repertoires in diseased or treated patients but also the presages and promises of computational approaches to revolutionize personalized immunotherapy.
Pubmed
Web of science
Open Access
Oui
Création de la notice
14/09/2020 8:40
Dernière modification de la notice
26/07/2022 6:10