Haplotypes in IL-8 Gene Are Associated to Age-Related Macular Degeneration: A Case-Control Study.

Details

Serval ID
serval:BIB_F430CBF801C3
Type
Article: article from journal or magazin.
Collection
Publications
Title
Haplotypes in IL-8 Gene Are Associated to Age-Related Macular Degeneration: A Case-Control Study.
Journal
PloS one
Author(s)
Ricci F., Staurenghi G., Lepre T., Missiroli F., Zampatti S., Cascella R., Borgiani P., Marsella L.T., Eandi C.M., Cusumano A., Novelli G., Giardina E.
ISSN
1932-6203 (Electronic)
ISSN-L
1932-6203
Publication state
Published
Issued date
2013
Peer-reviewed
Oui
Volume
8
Number
6
Pages
e66978
Language
english
Notes
Publication types: Journal Article
Publication Status: epublish
Abstract
Age-related macular degeneration (AMD) is the main cause of blindness in the developed world. The etiology of AMD is multifactorial due to the interaction between genetic and environmental factors. IL-8 has a role in inflammation and angiogenesis; we report the genetic characterization of IL-8 allele architecture and evaluate the role of SNPs or haplotypes in the susceptibility to wet AMD, case-control study.
Case-control study including 721 AMD patients and 660 controls becoming from Italian population. Genotyping was carried out by Real Time-PCR. Differences in the frequencies were estimated by the chi-square test. Direct sequencing was carried out by capillary electrophoresis trough ABI3130xl.
rs2227306 showed a p-value of 4.15*10(-5) and an Odds Ratio (OR) for T allele of 1.39 [1.19-1.62]. After these positive results, we sequenced the entire IL-8 regulatory and coding regions of 60 patients and 30 controls stratified for their genotype at rs2227306. We defined two different haplotypes involving rs4073 (A/T), rs2227306 (C/T), rs2227346 (C/T) and rs1126647 (A/T): A-T-T-T (p-value: 2.08*10(-9); OR: 1.68 [1.43-1.97]) and T-C-C-A (p-value: 7.07*10(-11); OR: 0.60 [0.51-0.70]). To further investigate a potential functional role of associated haplotypes, we performed an expression study on RNA extracted from whole blood of 75 donors to verify a possible direct correlation between haplotype and gene expression, failing to reveal significant differences.
These results suggest a possible secondary role of IL-8 gene in the development of the disease. This paper outlines the importance of association between inflammation and AMD. Moreover IL-8 is a new susceptibility genomic biomarker of AMD.
Keywords
Aged, Aged, 80 and over, Case-Control Studies, Female, Gene Expression Regulation, Genetic Association Studies/methods, Genetic Predisposition to Disease, Haplotypes, Humans, Interleukin-8/genetics, Macular Degeneration/genetics, Male, Middle Aged, Odds Ratio, Polymorphism, Single Nucleotide
Pubmed
Web of science
Open Access
Yes
Create date
12/03/2021 11:01
Last modification date
26/03/2021 7:35
Usage data