Deep computational image analysis of immune cell niches reveals treatment-specific outcome associations in lung cancer.

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State: Public
Version: Final published version
License: CC BY 4.0
Serval ID
serval:BIB_F2687BCAA27D
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Deep computational image analysis of immune cell niches reveals treatment-specific outcome associations in lung cancer.
Journal
NPJ precision oncology
Author(s)
Barrera C., Corredor G., Viswanathan V.S., Ding R., Toro P., Fu P., Buzzy C., Lu C., Velu P., Zens P., Berezowska S., Belete M., Balli D., Chang H., Baxi V., Syrigos K., Rimm D.L., Velcheti V., Schalper K., Romero E., Madabhushi A.
ISSN
2397-768X (Print)
ISSN-L
2397-768X
Publication state
Published
Issued date
01/06/2023
Peer-reviewed
Oui
Volume
7
Number
1
Pages
52
Language
english
Notes
Publication types: Journal Article
Publication Status: epublish
Abstract
The tumor immune composition influences prognosis and treatment sensitivity in lung cancer. The presence of effective adaptive immune responses is associated with increased clinical benefit after immune checkpoint blockers. Conversely, immunotherapy resistance can occur as a consequence of local T-cell exhaustion/dysfunction and upregulation of immunosuppressive signals and regulatory cells. Consequently, merely measuring the amount of tumor-infiltrating lymphocytes (TILs) may not accurately reflect the complexity of tumor-immune interactions and T-cell functional states and may not be valuable as a treatment-specific biomarker. In this work, we investigate an immune-related biomarker (PhenoTIL) and its value in associating with treatment-specific outcomes in non-small cell lung cancer (NSCLC). PhenoTIL is a novel computational pathology approach that uses machine learning to capture spatial interplay and infer functional features of immune cell niches associated with tumor rejection and patient outcomes. PhenoTIL's advantage is the computational characterization of the tumor immune microenvironment extracted from H&E-stained preparations. Association with clinical outcome and major non-small cell lung cancer (NSCLC) histology variants was studied in baseline tumor specimens from 1,774 lung cancer patients treated with immunotherapy and/or chemotherapy, including the clinical trial Checkmate 057 (NCT01673867).
Pubmed
Web of science
Open Access
Yes
Create date
02/06/2023 12:37
Last modification date
01/08/2023 5:55
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