Insights from the IronTract challenge: Optimal methods for mapping brain pathways from multi-shell diffusion MRI.

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State: Public
Version: Final published version
License: CC BY-NC-ND 4.0
Serval ID
serval:BIB_F21BD88EA802
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Insights from the IronTract challenge: Optimal methods for mapping brain pathways from multi-shell diffusion MRI.
Journal
NeuroImage
Author(s)
Maffei C., Girard G., Schilling K.G., Aydogan D.B., Adluru N., Zhylka A., Wu Y., Mancini M., Hamamci A., Sarica A., Teillac A., Baete S.H., Karimi D., Yeh F.C., Yildiz M.E., Gholipour A., Bihan-Poudec Y., Hiba B., Quattrone A., Quattrone A., Boshkovski T., Stikov N., Yap P.T., de Luca A., Pluim J., Leemans A., Prabhakaran V., Bendlin B.B., Alexander A.L., Landman B.A., Canales-Rodríguez E.J., Barakovic M., Rafael-Patino J., Yu T., Rensonnet G., Schiavi S., Daducci A., Pizzolato M., Fischi-Gomez E., Thiran J.P., Dai G., Grisot G., Lazovski N., Puch S., Ramos M., Rodrigues P., Prčkovska V., Jones R., Lehman J., Haber S.N., Yendiki A.
ISSN
1095-9572 (Electronic)
ISSN-L
1053-8119
Publication state
Published
Issued date
15/08/2022
Peer-reviewed
Oui
Volume
257
Pages
119327
Language
english
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't ; Research Support, N.I.H., Extramural
Publication Status: ppublish
Abstract
Limitations in the accuracy of brain pathways reconstructed by diffusion MRI (dMRI) tractography have received considerable attention. While the technical advances spearheaded by the Human Connectome Project (HCP) led to significant improvements in dMRI data quality, it remains unclear how these data should be analyzed to maximize tractography accuracy. Over a period of two years, we have engaged the dMRI community in the IronTract Challenge, which aims to answer this question by leveraging a unique dataset. Macaque brains that have received both tracer injections and ex vivo dMRI at high spatial and angular resolution allow a comprehensive, quantitative assessment of tractography accuracy on state-of-the-art dMRI acquisition schemes. We find that, when analysis methods are carefully optimized, the HCP scheme can achieve similar accuracy as a more time-consuming, Cartesian-grid scheme. Importantly, we show that simple pre- and post-processing strategies can improve the accuracy and robustness of many tractography methods. Finally, we find that fiber configurations that go beyond crossing (e.g., fanning, branching) are the most challenging for tractography. The IronTract Challenge remains open and we hope that it can serve as a valuable validation tool for both users and developers of dMRI analysis methods.
Keywords
Brain/diagnostic imaging, Connectome/methods, Diffusion, Diffusion Magnetic Resonance Imaging/methods, Diffusion Tensor Imaging/methods, Humans, Image Processing, Computer-Assisted/methods, White Matter, Anatomic tracing, Diffusion MRI, Tractography, Validation, White matter anatomy
Pubmed
Web of science
Open Access
Yes
Create date
07/06/2022 10:42
Last modification date
19/12/2023 8:28
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