MD and Docking Studies Reveal That the Functional Switch of CYFIP1 is Mediated by a Butterfly-like Motion.

Details

Serval ID
serval:BIB_F136232E6474
Type
Article: article from journal or magazin.
Collection
Publications
Title
MD and Docking Studies Reveal That the Functional Switch of CYFIP1 is Mediated by a Butterfly-like Motion.
Journal
Journal of chemical theory and computation
Author(s)
Di Marino D., Chillemi G., De Rubeis S., Tramontano A., Achsel T., Bagni C.
ISSN
1549-9626 (Electronic)
ISSN-L
1549-9618
Publication state
Published
Issued date
14/07/2015
Volume
11
Number
7
Pages
3401-3410
Language
english
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Abstract
Cytoplasmic FMRP interacting protein 1 (CYFIP1), also known as specifically RAC1 activated protein 1 (Sra1), plays a dual role: together with fragile X mental retardation protein (FMRP) and eIF4E it forms a complex that inhibits mRNA translation, while together with WAVE1, NCKAP1, ABI2, and HSPC300 it forms the WAVE regulatory complex (WRC) that upon RAC1 activation initiates actin polymerization. Here we performed a molecular dynamics (MD) simulation on CYFIP1 extracted from the known WRC structure, which shows that, in the absence of its WRC partners, a butterfly-like motion brings the two ends of CYFIP1 closer together, enabling the interaction with eIF4E. Our MD simulation is supported by available data showing that binding of CYFIP1 to eIF4E and binding to the WRC are mutually exclusive and that there is fluorescence resonance energy transfer between the N- and C-termini of CYFIP1. The differential interaction of RAC1-GTP with the two CYFIP1 structures predicts that RAC1 is directly responsible for the switch between these conformations.

Keywords
Adaptor Proteins, Signal Transducing/chemistry, Humans, Molecular Docking Simulation, Molecular Dynamics Simulation, Movement
Pubmed
Create date
06/03/2017 17:23
Last modification date
20/08/2019 16:18
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