Characterizing the unstructured intermediates in oxidative folding

Details

Serval ID
serval:BIB_EC932B2986F9
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Characterizing the unstructured intermediates in oxidative folding
Journal
Biochemistry
Author(s)
Narayan  M., Welker  E., Scheraga  H. A.
ISSN
0006-2960 (Print)
Publication state
Published
Issued date
06/2003
Volume
42
Number
23
Pages
6947-55
Notes
Comparative Study
Journal Article
Research Support, U.S. Gov't, P.H.S. --- Old month value: Jun 17
Abstract
A recently developed method is used here to characterize some of the folding intermediates, and the oxidative folding processes, of RNase A. This method is based on the ability of trans-[Pt(en)(2)Cl(2)](2+) to oxidize cysteine residues to form disulfide bonds faster than the disulfide bonds can be rearranged by reshuffling or reduction. Variations of this method have enabled us to address three issues. (i) How the nature of the residual structure and/or conformational order that is present, or develops, during the initial stages of folding can be elucidated. It is shown here that there is a 10-fold increase in the propensity of the unfolded reduced forms of RNase A to form the native set of disulfides directly, compared to the propensity under strongly denaturing conditions (4-6 M GdnHCl). Thus, the unfolded reduced forms of RNase A are not statistical coils with a more condensed form than in the GdnHCl-denatured state; rather, it is suggested that reduced RNase A has a little bias toward a native topology. (ii) The structural characterization of oxidative folding intermediates in terms of disulfide pairing is demonstrated; specifically, a lower-limit estimate is made of the percentage of native disulfide-containing molecules in the two-disulfide ensemble of RNase A. (iii) The critical role of structured intermediate species in determining the oxidative folding pathways of proteins was shown previously. Here, we demonstrate that the presence of a structured intermediate in the oxidative folding of proteins can be revealed by this method.
Keywords
Chromatography, High Pressure Liquid/methods Cysteine/chemistry Disulfides/*chemistry Guanidine/chemistry Hydrogen-Ion Concentration Isomerism Models, Biological Organoplatinum Compounds/chemistry Oxidation-Reduction Protein Denaturation Protein Folding Ribonuclease, Pancreatic/*chemistry
Pubmed
Web of science
Create date
24/01/2008 15:41
Last modification date
20/08/2019 17:14
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