Super-enhancer-based identification of a BATF3/IL-2R-module reveals vulnerabilities in anaplastic large cell lymphoma.

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Version: Final published version
License: CC BY 4.0
Serval ID
serval:BIB_E40D4F85C9A7
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Super-enhancer-based identification of a BATF3/IL-2R-module reveals vulnerabilities in anaplastic large cell lymphoma.
Journal
Nature communications
Author(s)
Liang H.C., Costanza M., Prutsch N., Zimmerman M.W., Gurnhofer E., Montes-Mojarro I.A., Abraham B.J., Prokoph N., Stoiber S., Tangermann S., Lobello C., Oppelt J., Anagnostopoulos I., Hielscher T., Pervez S., Klapper W., Zammarchi F., Silva D.A., Garcia K.C., Baker D., Janz M., Schleussner N., Fend F., Pospíšilová Š., Janiková A., Wallwitz J., Stoiber D., Simonitsch-Klupp I., Cerroni L., Pileri S., de Leval L., Sibon D., Fataccioli V., Gaulard P., Assaf C., Knörr F., Damm-Welk C., Woessmann W., Turner S.D., Look A.T., Mathas S., Kenner L., Merkel O.
ISSN
2041-1723 (Electronic)
ISSN-L
2041-1723
Publication state
Published
Issued date
22/09/2021
Peer-reviewed
Oui
Volume
12
Number
1
Pages
5577
Language
english
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: epublish
Abstract
Anaplastic large cell lymphoma (ALCL), an aggressive CD30-positive T-cell lymphoma, comprises systemic anaplastic lymphoma kinase (ALK)-positive, and ALK-negative, primary cutaneous and breast implant-associated ALCL. Prognosis of some ALCL subgroups is still unsatisfactory, and already in second line effective treatment options are lacking. To identify genes defining ALCL cell state and dependencies, we here characterize super-enhancer regions by genome-wide H3K27ac ChIP-seq. In addition to known ALCL key regulators, the AP-1-member BATF3 and IL-2 receptor (IL2R)-components are among the top hits. Specific and high-level IL2R expression in ALCL correlates with BATF3 expression. Confirming a regulatory link, IL-2R-expression decreases following BATF3 knockout, and BATF3 is recruited to IL2R regulatory regions. Functionally, IL-2, IL-15 and Neo-2/15, a hyper-stable IL-2/IL-15 mimic, accelerate ALCL growth and activate STAT1, STAT5 and ERK1/2. In line, strong IL-2Rα-expression in ALCL patients is linked to more aggressive clinical presentation. Finally, an IL-2Rα-targeting antibody-drug conjugate efficiently kills ALCL cells in vitro and in vivo. Our results highlight the importance of the BATF3/IL-2R-module for ALCL biology and identify IL-2Rα-targeting as a promising treatment strategy for ALCL.
Keywords
Animals, Basic-Leucine Zipper Transcription Factors/genetics, Basic-Leucine Zipper Transcription Factors/metabolism, Cell Line, Tumor, Cell Proliferation/drug effects, Cell Survival/drug effects, Gene Expression Regulation, Neoplastic, Humans, Immunoconjugates/pharmacology, Interleukin-15/pharmacology, Interleukin-2/pharmacology, Interleukin-2 Receptor alpha Subunit/genetics, Interleukin-2 Receptor alpha Subunit/immunology, Interleukin-2 Receptor alpha Subunit/metabolism, Ki-1 Antigen/genetics, Ki-1 Antigen/metabolism, Lymphoma, Large-Cell, Anaplastic/drug therapy, Lymphoma, Large-Cell, Anaplastic/genetics, Lymphoma, Large-Cell, Anaplastic/metabolism, Lymphoma, Large-Cell, Anaplastic/pathology, Mice, Receptors, Interleukin-2/genetics, Receptors, Interleukin-2/immunology, Receptors, Interleukin-2/metabolism, Regulatory Sequences, Nucleic Acid, Repressor Proteins/genetics, Repressor Proteins/metabolism, Signal Transduction/drug effects, Xenograft Model Antitumor Assays
Pubmed
Web of science
Open Access
Yes
Create date
27/09/2021 8:53
Last modification date
05/01/2022 8:12
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