Circadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver.
Details
Serval ID
serval:BIB_D6CB1961E2AD
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Circadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver.
Journal
Proceedings of the National Academy of Sciences of the United States of America
ISSN
1091-6490 (Electronic)
ISSN-L
0027-8424
Publication state
Published
Issued date
2014
Volume
111
Number
1
Pages
167-172
Language
english
Abstract
Diurnal oscillations of gene expression controlled by the circadian clock underlie rhythmic physiology across most living organisms. Although such rhythms have been extensively studied at the level of transcription and mRNA accumulation, little is known about the accumulation patterns of proteins. Here, we quantified temporal profiles in the murine hepatic proteome under physiological light-dark conditions using stable isotope labeling by amino acids quantitative MS. Our analysis identified over 5,000 proteins, of which several hundred showed robust diurnal oscillations with peak phases enriched in the morning and during the night and related to core hepatic physiological functions. Combined mathematical modeling of temporal protein and mRNA profiles indicated that proteins accumulate with reduced amplitudes and significant delays, consistent with protein half-life data. Moreover, a group comprising about one-half of the rhythmic proteins showed no corresponding rhythmic mRNAs, indicating significant translational or posttranslational diurnal control. Such rhythms were highly enriched in secreted proteins accumulating tightly during the night. Also, these rhythms persisted in clock-deficient animals subjected to rhythmic feeding, suggesting that food-related entrainment signals influence rhythms in circulating plasma factors.
Pubmed
Web of science
Open Access
Yes
Create date
14/02/2014 12:57
Last modification date
20/10/2020 8:19