Rare copy number variation in posttraumatic stress disorder.
Details
Serval ID
serval:BIB_B1960FF860D1
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Rare copy number variation in posttraumatic stress disorder.
Journal
Molecular psychiatry
Working group(s)
Psychiatric Genomics Consortium PTSD Working Group, Psychiatric Genomics Consortium CNV Working Group
ISSN
1476-5578 (Electronic)
ISSN-L
1359-4184
Publication state
Published
Issued date
12/2022
Peer-reviewed
Oui
Volume
27
Number
12
Pages
5062-5069
Language
english
Notes
Publication types: Journal Article
Publication Status: ppublish
Publication Status: ppublish
Abstract
Posttraumatic stress disorder (PTSD) is a heritable (h <sup>2</sup> = 24-71%) psychiatric illness. Copy number variation (CNV) is a form of rare genetic variation that has been implicated in the etiology of psychiatric disorders, but no large-scale investigation of CNV in PTSD has been performed. We present an association study of CNV burden and PTSD symptoms in a sample of 114,383 participants (13,036 cases and 101,347 controls) of European ancestry. CNVs were called using two calling algorithms and intersected to a consensus set. Quality control was performed to remove strong outlier samples. CNVs were examined for association with PTSD within each cohort using linear or logistic regression analysis adjusted for population structure and CNV quality metrics, then inverse variance weighted meta-analyzed across cohorts. We examined the genome-wide total span of CNVs, enrichment of CNVs within specified gene-sets, and CNVs overlapping individual genes and implicated neurodevelopmental regions. The total distance covered by deletions crossing over known neurodevelopmental CNV regions was significant (beta = 0.029, SE = 0.005, P = 6.3 × 10 <sup>-8</sup> ). The genome-wide neurodevelopmental CNV burden identified explains 0.034% of the variation in PTSD symptoms. The 15q11.2 BP1-BP2 microdeletion region was significantly associated with PTSD (beta = 0.0206, SE = 0.0056, P = 0.0002). No individual significant genes interrupted by CNV were identified. 22 gene pathways related to the function of the nervous system and brain were significant in pathway analysis (FDR q < 0.05), but these associations were not significant once NDD regions were removed. A larger sample size, better detection methods, and annotated resources of CNV are needed to explore this relationship further.
Keywords
Humans, DNA Copy Number Variations, Stress Disorders, Post-Traumatic/genetics, Genome, Brain, Genome-Wide Association Study, Polymorphism, Single Nucleotide, Genetic Predisposition to Disease
Pubmed
Web of science
Open Access
Yes
Create date
26/09/2022 12:34
Last modification date
23/01/2024 7:32