Gradual opening of Smc arms in prokaryotic condensin.

Details

Serval ID
serval:BIB_AC9DF70CFFD7
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Gradual opening of Smc arms in prokaryotic condensin.
Journal
Cell reports
Author(s)
Vazquez Nunez R., Polyhach Y., Soh Y.M., Jeschke G., Gruber S.
ISSN
2211-1247 (Electronic)
Publication state
Published
Issued date
27/04/2021
Peer-reviewed
Oui
Volume
35
Number
4
Pages
109051
Language
english
Notes
Publication types: Journal Article
Publication Status: ppublish
Abstract
Multi-subunit SMC ATPases control chromosome superstructure apparently by catalyzing a DNA-loop-extrusion reaction. SMC proteins harbor an ABC-type ATPase "head" and a "hinge" dimerization domain connected by a coiled coil "arm." Two arms in a SMC dimer can co-align, thereby forming a rod-shaped particle. Upon ATP binding, SMC heads engage, and arms are thought to separate. Here, we study the shape of Bacillus subtilis Smc-ScpAB by electron-spin resonance spectroscopy. Arm separation is readily detected proximal to the heads in the absence of ligands, and separation near the hinge largely depends on ATP and DNA. Artificial blockage of arm opening eliminates DNA stimulation of ATP hydrolysis but does not prevent basal ATPase activity. We report an arm contact as being important for controlling the transformations. Point mutations at this arm interface eliminated Smc function. We propose that partially open, intermediary conformations provide directionality to SMC DNA translocation by (un)binding suitable DNA substrates.
Keywords
DNA loop extrusion, ParB, SMC, ScpA, ScpB, Smc5, chromosome condensation, chromosome segregation, cohesin, condensin
Pubmed
Web of science
Open Access
Yes
Create date
11/05/2021 9:17
Last modification date
20/07/2022 6:39
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