RRTree: relative-rate tests between groups of sequences on a phylogenetic tree.
Details
Serval ID
serval:BIB_936DEEA56F2E
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
RRTree: relative-rate tests between groups of sequences on a phylogenetic tree.
Journal
Bioinformatics
ISSN
1367-4803 (Print)
ISSN-L
1367-4803
Publication state
Published
Issued date
2000
Volume
16
Number
3
Pages
296-297
Language
english
Abstract
RRTree is a user-friendly program for comparing substitution rates between lineages of protein or DNA sequences, relative to an outgroup, through relative rate tests. Genetic diversity is taken into account through use of several sequences, and phylogenetic relations are integrated by topological weighting. AVAILABILITY: The ANSI C source code of RRTree, and compiled versions for Macintosh, MS-DOS/Windows, SUN Solaris, and CGI, are freely available at http://pbil.univ-lyon1.fr/software/rrtree.html CONTACT: marc.robinson@ens-lyon.fr
Keywords
Algorithms, DNA/chemistry, Phylogeny, Proteins/chemistry, Sequence Analysis/methods, Software
Pubmed
Web of science
Open Access
Yes
Create date
24/01/2008 17:47
Last modification date
20/08/2019 14:56
Usage data
