Dynamic single-cell regulomes characterize human peripheral blood innate lymphoid cell subpopulations.

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Version: Final published version
License: CC BY 4.0
Serval ID
serval:BIB_87C8B53F2522
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Dynamic single-cell regulomes characterize human peripheral blood innate lymphoid cell subpopulations.
Journal
iScience
Author(s)
Falquet M., Su Z., Wyss T., Ercolano G., Trabanelli S., Jandus C.
ISSN
2589-0042 (Electronic)
ISSN-L
2589-0042
Publication state
Published
Issued date
15/09/2023
Peer-reviewed
Oui
Volume
26
Number
9
Pages
107728
Language
english
Notes
Publication types: Journal Article
Publication Status: epublish
Abstract
Innate lymphoid cells (ILCs) are plastic immune cells divided into 3 main subsets, characterized by distinct phenotypic and functional profiles. Using single cell approaches, heightened heterogeneity of mouse ILCs has been appreciated, imprinted by tissue signals that shape their transcriptome and epigenome. Intra-subset diversity has also been observed in human ILCs. However, combined transcriptomic and epigenetic analyses of single ILCs in humans are lacking. Here, we show high transcriptional and epigenetic heterogeneity among human circulating ILCs in healthy individuals. We describe phenotypically distinct subclusters and diverse chromatin accessibility within main ILC populations, compatible with differentially poised states. We validate the use of this healthy donor-based analysis as resource dataset to help inferring ILC changes occurring in disease conditions. Overall, our work provides insights in the complex human ILC biology. We anticipate it to facilitate hypothesis-driven studies in patients, without the need to perform single cell OMICs using precious patients' material.
Keywords
Cell biology, Components of the immune system, Immunology, Transcriptomics
Pubmed
Web of science
Open Access
Yes
Create date
25/09/2023 15:04
Last modification date
25/01/2024 7:39
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