Génomique et métagénomique bactériennes: applications cliniques et importance médicale [Bacterial genomics and metagenomics: clinical applications and medical relevance]

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State: Public
Version: Final published version
Serval ID
serval:BIB_6E939DC2252F
Type
Article: article from journal or magazin.
Publication sub-type
Review (review): journal as complete as possible of one specific subject, written based on exhaustive analyses from published work.
Collection
Publications
Institution
Title
Génomique et métagénomique bactériennes: applications cliniques et importance médicale [Bacterial genomics and metagenomics: clinical applications and medical relevance]
Journal
Revue medicale suisse
Author(s)
Diene S.M., Bertelli C., Pillonel T., Schrenzel J., Greub G.
ISSN
1660-9379 (Print)
ISSN-L
1660-9379
Publication state
Published
Issued date
12/11/2014
Peer-reviewed
Oui
Volume
10
Number
450
Pages
2155-2161
Language
french
Notes
Publication types: English Abstract ; Journal Article
Publication Status: ppublish
Abstract
New sequencing technologies provide in a short time and at low cost high amount of genomic sequences useful for applications such as: a) development of diagnostic PCRs and/or serological tests; b) detection of virulence factors (virulome) or genes/SNPs associated with resistance to antibiotics (resistome) and c) investigation of transmission and dissemination of bacterial pathogens. Thus, bacterial genomics of medical importance is useful to clinical microbiologists, to infectious diseases specialists as well as to epidemiologists. Determining the microbial composition of a sample by metagenomics is another application of new sequencing technologies, useful to understand the impact of bacteria on various non-infectious diseases such as obesity, asthma, or diabetes. Genomics and metagenomics will likely become a specialized diagnostic analysis.

Keywords
Anti-Bacterial Agents/pharmacology, Bacteria/genetics, Bacteria/isolation & purification, Bacterial Infections/diagnosis, Bacterial Infections/microbiology, Drug Resistance, Bacterial, Genome, Bacterial, Genomics/methods, Humans, Metagenomics/methods
Pubmed
Create date
26/01/2018 12:18
Last modification date
20/08/2019 14:27
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