A dimensionless fit measure for phylogenetic distance trees.

Details

Serval ID
serval:BIB_647B72A3D448
Type
Article: article from journal or magazin.
Collection
Publications
Title
A dimensionless fit measure for phylogenetic distance trees.
Journal
Journal of bioinformatics and computational biology
Author(s)
Gil M., Dessimoz C., Gonnet G.H.
ISSN
0219-7200 (Print)
ISSN-L
0219-7200
Publication state
Published
Issued date
12/2005
Peer-reviewed
Oui
Volume
3
Number
6
Pages
1429-1440
Language
english
Notes
Publication types: Journal Article
Publication Status: ppublish
Abstract
We present a dimensionless fit index for phylogenetic trees that have been constructed from distance matrices. It is designed to measure the quality of the fit of the data to a tree in absolute terms, independent of linear transformations on the distance matrix. The index can be used as an absolute measure to evaluate how well a set of data fits to a tree, or as a relative measure to compare different methods that are expected to produce the same tree. The usefulness of the index is demonstrated in three examples.
Keywords
Algorithms, Biological Evolution, Data Interpretation, Statistical, Evolution, Molecular, Models, Genetic, Models, Statistical, Numerical Analysis, Computer-Assisted, Phylogeny
Pubmed
Create date
02/09/2015 9:16
Last modification date
06/03/2024 10:12
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