Depthgram: Visualizing outliers in high-dimensional functional data with application to fMRI data exploration.

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Version: Final published version
License: CC BY-NC-ND 4.0
Serval ID
serval:BIB_53B6D37E0A2B
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Depthgram: Visualizing outliers in high-dimensional functional data with application to fMRI data exploration.
Journal
Statistics in medicine
Author(s)
Alemán-Gómez Y., Arribas-Gil A., Desco M., Elías A., Romo J.
ISSN
1097-0258 (Electronic)
ISSN-L
0277-6715
Publication state
Published
Issued date
20/05/2022
Peer-reviewed
Oui
Volume
41
Number
11
Pages
2005-2024
Language
english
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Abstract
Functional magnetic resonance imaging (fMRI) is a non-invasive technique that facilitates the study of brain activity by measuring changes in blood flow. Brain activity signals can be recorded during the alternate performance of given tasks, that is, task fMRI (tfMRI), or during resting-state, that is, resting-state fMRI (rsfMRI), as a measure of baseline brain activity. This contributes to the understanding of how the human brain is organized in functionally distinct subdivisions. fMRI experiments from high-resolution scans provide hundred of thousands of longitudinal signals for each individual, corresponding to brain activity measurements over each voxel of the brain along the duration of the experiment. In this context, we propose novel visualization techniques for high-dimensional functional data relying on depth-based notions that enable computationally efficient 2-dim representations of fMRI data, which elucidate sample composition, outlier presence, and individual variability. We believe that this previous step is crucial to any inferential approach willing to identify neuroscientific patterns across individuals, tasks, and brain regions. We present the proposed technique via an extensive simulation study, and demonstrate its application on a motor and language tfMRI experiment.
Keywords
Brain/diagnostic imaging, Brain Mapping/methods, Humans, Language, Magnetic Resonance Imaging, FMRI, data visualization, dimensionality reduction, functional depth, multidimensional outliers
Pubmed
Web of science
Open Access
Yes
Create date
12/02/2022 15:00
Last modification date
25/01/2024 7:36
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