Inosine Substitutions in RNA Activate Latent G-Quadruplexes.
Details
Serval ID
serval:BIB_419D75E87BF6
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Inosine Substitutions in RNA Activate Latent G-Quadruplexes.
Journal
Journal of the American Chemical Society
ISSN
1520-5126 (Electronic)
ISSN-L
0002-7863
Publication state
Published
Issued date
22/09/2021
Peer-reviewed
Oui
Volume
143
Number
37
Pages
15120-15130
Language
english
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Publication Status: ppublish
Abstract
It is well-accepted that gene expression is heavily influenced by RNA structure. For instance, stem-loops and G-quadruplexes (rG4s) are dynamic motifs in mRNAs that influence gene expression. Adenosine-to-inosine (A-to-I) editing is a common chemical modification of RNA which introduces a nucleobase that is iso-structural with guanine, thereby changing RNA base-pairing properties. Here, we provide biophysical, chemical, and biological evidence that A-to-I exchange can activate latent rG4s by filling incomplete G-quartets with inosine. We demonstrate the formation of inosine-containing rG4s (GI-quadruplexes) in vitro and verify their activity in cells. GI-quadruplexes adopt parallel topologies, stabilized by potassium ions. They exhibit moderately reduced thermal stability compared to conventional G-quadruplexes. To study inosine-induced structural changes in a naturally occurring RNA, we use a synthetic approach that enables site-specific inosine incorporation in long RNAs. In summary, RNA GI-quadruplexes are a previously unrecognized structural motif that may contribute to the regulation of gene expression in vivo.
Keywords
Base Pairing, G-Quadruplexes, Gene Expression Regulation/drug effects, HEK293 Cells, Humans, Inosine/chemistry, Nucleic Acid Conformation, RNA/chemistry
Pubmed
Web of science
Open Access
Yes
Create date
21/09/2021 10:32
Last modification date
01/09/2022 5:42