MetaNetX.org: a website and repository for accessing, analysing and manipulating metabolic networks.

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Ressource 1Download: BIB_364863E29541.P001.pdf (262.62 [Ko])
State: Public
Version: author
Serval ID
serval:BIB_364863E29541
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
MetaNetX.org: a website and repository for accessing, analysing and manipulating metabolic networks.
Journal
Bioinformatics
Author(s)
Ganter M., Bernard T., Moretti S., Stelling J., Pagni M.
ISSN
1367-4811 (Electronic)
ISSN-L
1367-4803
Publication state
Published
Issued date
2013
Peer-reviewed
Oui
Volume
29
Number
6
Pages
815-816
Language
english
Abstract
SUMMARY: MetaNetX.org is a website for accessing, analysing and manipulating genome-scale metabolic networks (GSMs) as well as biochemical pathways. It consistently integrates data from various public resources and makes the data accessible in a standardized format using a common namespace. Currently, it provides access to hundreds of GSMs and pathways that can be interactively compared (two or more), analysed (e.g. detection of dead-end metabolites and reactions, flux balance analysis or simulation of reaction and gene knockouts), manipulated and exported. Users can also upload their own metabolic models, choose to automatically map them into the common namespace and subsequently make use of the website's functionality. Availability and implementation: MetaNetX.org is available at http://metanetx.org. CONTACT: help@metanetx.org.
Pubmed
Web of science
Open Access
Yes
Create date
18/03/2013 14:00
Last modification date
20/08/2019 13:24
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