Imaging phenotypes predict overall survival in glioma more accurate than basic demographic and cell mutation profiles.

Details

Serval ID
serval:BIB_310D3FCC0F3B
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Imaging phenotypes predict overall survival in glioma more accurate than basic demographic and cell mutation profiles.
Journal
Computer methods and programs in biomedicine
Author(s)
Rathore S., Iftikhar M.A., Chaddad A., Singh A., Gillani Z., Abdulkadir A.
ISSN
1872-7565 (Electronic)
ISSN-L
0169-2607
Publication state
Published
Issued date
12/2023
Peer-reviewed
Oui
Volume
242
Pages
107812
Language
english
Notes
Publication types: Journal Article
Publication Status: ppublish
Abstract
Magnetic resonance imaging (MRI), digital pathology imaging (PATH), demographics, and IDH mutation status predict overall survival (OS) in glioma. Identifying and characterizing predictive features in the different modalities may improve OS prediction accuracy.
To evaluate the OS prediction accuracy of combinations of prognostic markers in glioma patients.
Multi-contrast MRI, comprising T1-weighted, T1-weighted post-contrast, T2-weighted, T2 fluid-attenuated-inversion-recovery, and pathology images from glioma patients (n = 160) were retrospectively collected (1983-2008) from TCGA alongside age and sex. Phenotypic profiling of tumors was performed by quantifying the radiographic and histopathologic descriptors extracted from the delineated region-of-interest in MRI and PATH images. A Cox proportional hazard model was trained with the MRI and PATH features, IDH mutation status, and basic demographic variables (age and sex) to predict OS. The performance was evaluated in a split-train-test configuration using the concordance-index, computed between the predicted risk score and observed OS.
The average age of patients was 51.2years (women: n = 77, age-range=18-84years; men: n = 83, age-range=21-80years). The median OS of the participants was 494.5 (range,3-4752), 481 (range,7-4752), and 524.5 days (range,3-2869), respectively, in complete dataset, training, and test datasets. The addition of MRI or PATH features improved prediction of OS when compared to models based on age, sex, and mutation status alone or their combination (p < 0.001). The full multi-omics model integrated MRI, PATH, clinical, and genetic profiles and predicted the OS best (c-index= 0.87).
The combination of imaging, genetic, and clinical profiles leads to a more accurate prognosis than the clinical and/or mutation status.
Keywords
Male, Humans, Female, Adolescent, Young Adult, Adult, Middle Aged, Aged, Aged, 80 and over, Brain Neoplasms/diagnostic imaging, Brain Neoplasms/genetics, Retrospective Studies, Isocitrate Dehydrogenase/genetics, Glioma/diagnostic imaging, Glioma/genetics, Magnetic Resonance Imaging/methods, Phenotype, Mutation, Demography, Clinical measures, Digital histopathology images, Genomic markers, Gliomas, Machine learning, Multi-omics, Radiographic images
Pubmed
Web of science
Create date
29/09/2023 15:09
Last modification date
19/12/2023 8:13
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