The tidyomics ecosystem: Enhancing omic data analyses.
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Serval ID
serval:BIB_2E7F8476CE75
Type
Autre: use this type when nothing else fits.
Collection
Publications
Institution
Title
The tidyomics ecosystem: Enhancing omic data analyses.
Language
english
Abstract
The growth of omic data presents evolving challenges in data manipulation, analysis, and integration. Addressing these challenges, Bioconductor <sup>1</sup> provides an extensive community-driven biological data analysis platform. Meanwhile, tidy R programming <sup>2</sup> offers a revolutionary standard for data organisation and manipulation. Here, we present the tidyomics software ecosystem, bridging Bioconductor to the tidy R paradigm. This ecosystem aims to streamline omic analysis, ease learning, and encourage cross-disciplinary collaborations. We demonstrate the effectiveness of tidyomics by analysing 7.5 million peripheral blood mononuclear cells from the Human Cell Atlas <sup>3</sup> , spanning six data frameworks and ten analysis tools.
Pubmed
Create date
13/06/2024 15:05
Last modification date
14/06/2024 6:03