Computational pathology improves risk stratification of a multi-gene assay for early stage ER+ breast cancer.

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State: Public
Version: Final published version
License: CC BY 4.0
Serval ID
serval:BIB_201782BCB903
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Computational pathology improves risk stratification of a multi-gene assay for early stage ER+ breast cancer.
Journal
NPJ breast cancer
Author(s)
Chen Y., Li H., Janowczyk A., Toro P., Corredor G., Whitney J., Lu C., Koyuncu C.F., Mokhtari M., Buzzy C., Ganesan S., Feldman M.D., Fu P., Corbin H., Harbhajanka A., Gilmore H., Goldstein L.J., Davidson N.E., Desai S., Parmar V., Madabhushi A.
ISSN
2374-4677 (Print)
ISSN-L
2374-4677
Publication state
Published
Issued date
17/05/2023
Peer-reviewed
Oui
Volume
9
Number
1
Pages
40
Language
english
Notes
Publication types: Journal Article
Publication Status: epublish
Abstract
Prognostic markers currently utilized in clinical practice for estrogen receptor-positive (ER+) and lymph node-negative (LN-) invasive breast cancer (IBC) patients include the Nottingham grading system and Oncotype Dx (ODx). However, these biomarkers are not always optimal and remain subject to inter-/intra-observer variability and high cost. In this study, we evaluated the association between computationally derived image features from H&E images and disease-free survival (DFS) in ER+ and LN- IBC. H&E images from a total of n = 321 patients with ER+ and LN- IBC from three cohorts were employed for this study (Training set: D1 (n = 116), Validation sets: D2 (n = 121) and D3 (n = 84)). A total of 343 features relating to nuclear morphology, mitotic activity, and tubule formation were computationally extracted from each slide image. A Cox regression model (IbRiS) was trained to identify significant predictors of DFS and predict a high/low-risk category using D1 and was validated on independent testing sets D2 and D3 as well as within each ODx risk category. IbRiS was significantly prognostic of DFS with a hazard ratio (HR) of 2.33 (95% confidence interval (95% CI) = 1.02-5.32, p = 0.045) on D2 and a HR of 2.94 (95% CI = 1.18-7.35, p = 0.0208) on D3. In addition, IbRiS yielded significant risk stratification within high ODx risk categories (D1 + D2: HR = 10.35, 95% CI = 1.20-89.18, p = 0.0106; D1: p = 0.0238; D2: p = 0.0389), potentially providing more granular risk stratification than offered by ODx alone.
Pubmed
Web of science
Open Access
Yes
Create date
23/05/2023 13:01
Last modification date
08/08/2024 6:30
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