RACE: Remote Analysis Computation for gene Expression data

Details

Serval ID
serval:BIB_16958AE0783D
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
RACE: Remote Analysis Computation for gene Expression data
Journal
Nucleic Acids Research
Author(s)
Psarros  M., Heber  S., Sick  M., Thoppae  G., Harshman  K., Sick  B.
ISSN
1362-4962 (Electronic)
Publication state
Published
Issued date
07/2005
Volume
33
Number
Web Server issue
Pages
W638-43
Notes
Journal Article
Research Support, Non-U.S. Gov't --- Old month value: Jul 1
Abstract
The Remote Analysis Computation for gene Expression data (RACE) suite is a collection of bioinformatics web tools designed for the analysis of DNA microarray data. RACE performs probe-level data preprocessing, extensive quality checks, data visualization and data normalization for Affymetrix GeneChips. In addition, it offers differential expression analysis on normalized expression levels from any array platform. RACE estimates the false discovery rates of lists of potentially regulated genes and provides a Gene Ontology-term analysis tool for GeneChip data to support the biological interpretation and annotation of results. The analysis is fully automated but can be customized by flexible parameter settings. To offer a convenient starting point for subsequent analyses, and to provide maximum transparency, the R scripts used to generate the results can be downloaded along with the output files. RACE is freely available for use at http://race.unil.ch.
Keywords
*Computational Biology Computer Graphics Gene Expression Profiling/*methods/standards Internet Oligonucleotide Array Sequence Analysis/*methods/standards Quality Control *Software User-Computer Interface
Pubmed
Web of science
Open Access
Yes
Create date
24/01/2008 16:33
Last modification date
20/08/2019 13:46
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