Interplay between the catabolite repression control protein Crc, Hfq and RNA in Hfq-dependent translational regulation in Pseudomonas aeruginosa.
Details
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State: Public
Version: Final published version
State: Public
Version: Final published version
Serval ID
serval:BIB_0C70B756D940
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Interplay between the catabolite repression control protein Crc, Hfq and RNA in Hfq-dependent translational regulation in Pseudomonas aeruginosa.
Journal
Nucleic acids research
ISSN
1362-4962 (Electronic)
ISSN-L
0305-1048
Publication state
Published
Issued date
16/02/2018
Peer-reviewed
Oui
Volume
46
Number
3
Pages
1470-1485
Language
english
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Publication Status: ppublish
Abstract
In Pseudomonas aeruginosa the RNA chaperone Hfq and the catabolite repression control protein (Crc) act as post-transcriptional regulators during carbon catabolite repression (CCR). In this regard Crc is required for full-fledged Hfq-mediated translational repression of catabolic genes. RNAseq based transcriptome analyses revealed a significant overlap between the Crc and Hfq regulons, which in conjunction with genetic data supported a concerted action of both proteins. Biochemical and biophysical approaches further suggest that Crc and Hfq form an assembly in the presence of RNAs containing A-rich motifs, and that Crc interacts with both, Hfq and RNA. Through these interactions, Crc enhances the stability of Hfq/Crc/RNA complexes, which can explain its facilitating role in Hfq-mediated translational repression. Hence, these studies revealed for the first time insights into how an interacting protein can modulate Hfq function. Moreover, Crc is shown to interfere with binding of a regulatory RNA to Hfq, which bears implications for riboregulation. These results are discussed in terms of a working model, wherein Crc prioritizes the function of Hfq toward utilization of favored carbon sources.
Keywords
Bacterial Proteins/chemistry, Bacterial Proteins/genetics, Bacterial Proteins/metabolism, Binding Sites, Bordetella pertussis/genetics, Bordetella pertussis/metabolism, Carbohydrate Metabolism/genetics, Catabolite Repression, Escherichia coli/genetics, Escherichia coli/metabolism, Gene Expression Regulation, Bacterial, Host Factor 1 Protein/chemistry, Host Factor 1 Protein/genetics, Host Factor 1 Protein/metabolism, Kinetics, Models, Molecular, Nucleotide Motifs, Protein Binding, Protein Biosynthesis, Protein Interaction Domains and Motifs, Protein Structure, Secondary, Pseudomonas aeruginosa/genetics, Pseudomonas aeruginosa/metabolism, RNA, Bacterial/chemistry, RNA, Bacterial/genetics, RNA, Bacterial/metabolism, Regulon, Repressor Proteins/chemistry, Repressor Proteins/genetics, Repressor Proteins/metabolism, Transcriptome
Pubmed
Web of science
Open Access
Yes
Create date
11/01/2018 17:28
Last modification date
21/11/2022 8:17