Ribotyping of Pseudomonas aeruginosa: discriminatory power and usefulness as a tool for epidemiological studies
Détails
ID Serval
serval:BIB_A6FEB04C602A
Type
Article: article d'un périodique ou d'un magazine.
Collection
Publications
Institution
Titre
Ribotyping of Pseudomonas aeruginosa: discriminatory power and usefulness as a tool for epidemiological studies
Périodique
Journal of Clinical Microbiology
ISSN
0095-1137
Statut éditorial
Publié
Date de publication
01/1993
Peer-reviewed
Oui
Volume
31
Numéro
1
Pages
71-7
Notes
Journal Article --- Old month value: Jan
Résumé
Restriction fragment length polymorphism of ribosomal DNA regions (ribotyping) of Pseudomonas aeruginosa was evaluated as a tool for epidemiological purposes. Fifty-five epidemiologically unrelated isolates from three geographic areas of Switzerland and 11 isolates obtained during an outbreak of P. aeruginosa infections in a burn unit were typed by this method. Typeability and reproducibility of the method reached 100%. With four selected restriction enzymes (BamHI, ClaI, EcoRI, and PstI), the 55 unrelated isolates could be classified into 33 ribotypes. To assess the value of this method for the interpretation of epidemiological data, we calculated an index of discrimination (ID) which takes into consideration both the number of types defined by the typing method and their relative frequencies. Our ribotyping system obtained a high ID of 0.958 with only four restriction enzymes, comparing well with other different typing schemes for which ID values could be calculated from published data. All clinical isolates of the outbreak belonged to the same ribotype, whereas environmental isolates, initially thought to be the source of the epidemic, belonged to a different ribotype. Thus, the typeability, reproducibility, and discriminatory power of our method as well as its value established in an epidemiological investigation were found to be appropriate for further epidemiological studies of P. aeruginosa.
Mots-clé
*Bacterial Typing Techniques
Blotting, Southern
Burn Units
Cross Infection/microbiology
DNA, Ribosomal/*genetics
Deoxyribonucleases, Type II Site-Specific
Discriminant Analysis
Disease Outbreaks
Epidemiologic Methods
Humans
Polymorphism, Restriction Fragment Length
Pseudomonas Infections/epidemiology/*microbiology
Pseudomonas aeruginosa/*classification/genetics
Reproducibility of Results
Sensitivity and Specificity
Serotyping
Pubmed
Web of science
Création de la notice
29/01/2008 15:20
Dernière modification de la notice
20/08/2019 15:11