Transcription organizes euchromatin via microphase separation.

Détails

ID Serval
serval:BIB_6C31278C4B11
Type
Article: article d'un périodique ou d'un magazine.
Collection
Publications
Institution
Titre
Transcription organizes euchromatin via microphase separation.
Périodique
Nature communications
Auteur⸱e⸱s
Hilbert L., Sato Y., Kuznetsova K., Bianucci T., Kimura H., Jülicher F., Honigmann A., Zaburdaev V., Vastenhouw N.L.
ISSN
2041-1723 (Electronic)
ISSN-L
2041-1723
Statut éditorial
Publié
Date de publication
01/03/2021
Peer-reviewed
Oui
Volume
12
Numéro
1
Pages
1360
Langue
anglais
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: epublish
Résumé
In eukaryotes, DNA is packed inside the cell nucleus in the form of chromatin, which consists of DNA, proteins such as histones, and RNA. Euchromatin, which is permissive for transcription, is spatially organized into transcriptionally inactive domains interspersed with pockets of transcriptional activity. While transcription and RNA have been implicated in euchromatin organization, it remains unclear how their interplay forms and maintains transcription pockets. Here we combine theory and experiment to analyze the dynamics of euchromatin organization as pluripotent zebrafish cells exit mitosis and begin transcription. We show that accumulation of RNA induces formation of transcription pockets which displace transcriptionally inactive chromatin. We propose that the accumulating RNA recruits RNA-binding proteins that together tend to separate from transcriptionally inactive euchromatin. Full phase separation is prevented because RNA remains tethered to transcribed euchromatin through RNA polymerases. Instead, smaller scale microphases emerge that do not grow further and form the typical pattern of euchromatin organization.
Mots-clé
Animals, Computer Simulation, Embryo, Nonmammalian/metabolism, Emulsions/chemistry, Euchromatin/genetics, Mitosis/genetics, RNA/metabolism, RNA Stability, Transcription, Genetic, Zebrafish/embryology
Pubmed
Web of science
Open Access
Oui
Création de la notice
08/03/2021 15:25
Dernière modification de la notice
20/02/2024 8:18
Données d'usage