Experimental and computational approaches to quantitative proteomics: status quo and outlook.

Détails

ID Serval
serval:BIB_699FD94D1B7A
Type
Article: article d'un périodique ou d'un magazine.
Sous-type
Synthèse (review): revue aussi complète que possible des connaissances sur un sujet, rédigée à partir de l'analyse exhaustive des travaux publiés.
Collection
Publications
Institution
Titre
Experimental and computational approaches to quantitative proteomics: status quo and outlook.
Périodique
Journal of Proteomics
Auteur⸱e⸱s
Panchaud A., Affolter M., Moreillon P., Kussmann M.
ISSN
1874-3919 (Print)
Statut éditorial
Publié
Date de publication
2008
Volume
71
Numéro
1
Pages
19-33
Langue
anglais
Notes
Publication types: Journal Article ; Review
Publication Status: ppublish
Résumé
Proteomics has come a long way from the initial qualitative analysis of proteins present in a given sample at a given time ("cataloguing") to large-scale characterization of proteomes, their interactions and dynamic behavior. Originally enabled by breakthroughs in protein separation and visualization (by two-dimensional gels) and protein identification (by mass spectrometry), the discipline now encompasses a large body of protein and peptide separation, labeling, detection and sequencing tools supported by computational data processing. The decisive mass spectrometric developments and most recent instrumentation news are briefly mentioned accompanied by a short review of gel and chromatographic techniques for protein/peptide separation, depletion and enrichment. Special emphasis is placed on quantification techniques: gel-based, and label-free techniques are briefly discussed whereas stable-isotope coding and internal peptide standards are extensively reviewed. Another special chapter is dedicated to software and computing tools for proteomic data processing and validation. A short assessment of the status quo and recommendations for future developments round up this journey through quantitative proteomics.
Mots-clé
Computational Biology/methods, Computational Biology/trends, Humans, Proteins/isolation & purification, Proteomics/instrumentation, Proteomics/methods
Pubmed
Web of science
Création de la notice
29/01/2009 23:13
Dernière modification de la notice
20/08/2019 15:24
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