Tcoffee@igs: A web server for computing, evaluating and combining multiple sequence alignments.

Détails

ID Serval
serval:BIB_27597
Type
Article: article d'un périodique ou d'un magazine.
Collection
Publications
Institution
Titre
Tcoffee@igs: A web server for computing, evaluating and combining multiple sequence alignments.
Périodique
Nucleic Acids Research
Auteur⸱e⸱s
Poirot O., O'Toole E., Notredame C.
ISSN
1362-4962[electronic]
Statut éditorial
Publié
Date de publication
2003
Volume
31
Numéro
13
Pages
3503-3506
Langue
anglais
Notes
Publication types: Journal Article
Résumé
This paper presents Tcoffee@igs, a new server provided to the community by Hewlet Packard computers and the Centre National de la Recherche Scientifique. This server is a web-based tool dedicated to the computation, the evaluation and the combination of multiple sequence alignments. It uses the latest version of the T-Coffee package. Given a set of unaligned sequences, the server returns an evaluated multiple sequence alignment and the associated phylogenetic tree. This server also makes it possible to evaluate the local reliability of an existing alignment and to combine several alternative multiple alignments into a single new one. Tcoffee@igs can be used for aligning protein, RNA or DNA sequences. Datasets of up to 100 sequences (2000 residues long) can be processed. The server and its documentation are available from: http://igs-server.cnrs-mrs.fr/Tcoffee/.
Mots-clé
Consensus Sequence, Internet, Phylogeny, Sequence Alignment/methods, Sequence Analysis, DNA/methods, Sequence Analysis, Protein/methods, Sequence Analysis, RNA/methods, Software
Pubmed
Web of science
Open Access
Oui
Création de la notice
19/11/2007 10:54
Dernière modification de la notice
20/08/2019 14:06
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