Tcoffee@igs: A web server for computing, evaluating and combining multiple sequence alignments.

Details

Serval ID
serval:BIB_27597
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Tcoffee@igs: A web server for computing, evaluating and combining multiple sequence alignments.
Journal
Nucleic Acids Research
Author(s)
Poirot O., O'Toole E., Notredame C.
ISSN
1362-4962[electronic]
Publication state
Published
Issued date
2003
Volume
31
Number
13
Pages
3503-3506
Language
english
Notes
Publication types: Journal Article
Abstract
This paper presents Tcoffee@igs, a new server provided to the community by Hewlet Packard computers and the Centre National de la Recherche Scientifique. This server is a web-based tool dedicated to the computation, the evaluation and the combination of multiple sequence alignments. It uses the latest version of the T-Coffee package. Given a set of unaligned sequences, the server returns an evaluated multiple sequence alignment and the associated phylogenetic tree. This server also makes it possible to evaluate the local reliability of an existing alignment and to combine several alternative multiple alignments into a single new one. Tcoffee@igs can be used for aligning protein, RNA or DNA sequences. Datasets of up to 100 sequences (2000 residues long) can be processed. The server and its documentation are available from: http://igs-server.cnrs-mrs.fr/Tcoffee/.
Keywords
Consensus Sequence, Internet, Phylogeny, Sequence Alignment/methods, Sequence Analysis, DNA/methods, Sequence Analysis, Protein/methods, Sequence Analysis, RNA/methods, Software
Pubmed
Web of science
Open Access
Yes
Create date
19/11/2007 10:54
Last modification date
20/08/2019 14:06
Usage data