Translation is required for miRNA-dependent decay of endogenous transcripts.

Détails

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Etat: Public
Version: Final published version
Licence: CC BY 4.0
ID Serval
serval:BIB_1E9949CC6BEE
Type
Article: article d'un périodique ou d'un magazine.
Collection
Publications
Institution
Titre
Translation is required for miRNA-dependent decay of endogenous transcripts.
Périodique
The EMBO journal
Auteur⸱e⸱s
Biasini A., Abdulkarim B., de Pretis S., Tan J.Y., Arora R., Wischnewski H., Dreos R., Pelizzola M., Ciaudo C., Marques A.C.
ISSN
1460-2075 (Electronic)
ISSN-L
0261-4189
Statut éditorial
Publié
Date de publication
01/02/2021
Peer-reviewed
Oui
Volume
40
Numéro
3
Pages
e104569
Langue
anglais
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Résumé
Post-transcriptional repression of gene expression by miRNAs occurs through transcript destabilization or translation inhibition. mRNA decay is known to account for most miRNA-dependent repression. However, because transcript decay occurs co-translationally, whether target translation is a requirement for miRNA-dependent transcript destabilization remains unknown. To decouple these two molecular processes, we used cytosolic long noncoding RNAs (lncRNAs) as models for endogenous transcripts that are not translated. We show that, despite interacting with the miRNA-loaded RNA-induced silencing complex, the steady-state abundance and decay rates of these transcripts are minimally affected by miRNA loss. To further validate the apparent requirement of translation for miRNA-dependent decay, we fused two lncRNA candidates to the 3'-end of a protein-coding gene reporter and found this results in their miRNA-dependent destabilization. Further analysis revealed that the few natural lncRNAs whose levels are regulated by miRNAs in mESCs tend to associate with translating ribosomes, and possibly represent misannotated micropeptides, further substantiating the necessity of target translation for miRNA-dependent transcript decay. In summary, our analyses suggest that translation is required for miRNA-dependent transcript destabilization, and demonstrate that the levels of coding and noncoding transcripts are differently affected by miRNAs.
Mots-clé
Animals, Artificial Gene Fusion, Cell Line, Gene Expression Regulation, Genes, Reporter, High-Throughput Nucleotide Sequencing, Mice, MicroRNAs/genetics, Mouse Embryonic Stem Cells/cytology, Mouse Embryonic Stem Cells/metabolism, Protein Biosynthesis, RNA Stability, RNA, Long Noncoding/genetics, RNA, Messenger/chemistry, RNA, Messenger/metabolism, Ribosomes/metabolism, Sequence Analysis, RNA, Dicer knockout mESC, RNA metabolic labelling, long noncoding RNAs, miRNA, translation
Pubmed
Web of science
Open Access
Oui
Création de la notice
22/12/2020 12:14
Dernière modification de la notice
23/01/2024 8:21
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