A regulated two-step mechanism of TBP binding to DNA: a solvent-exposed surface of TBP inhibits TATA box recognition.

Details

Serval ID
serval:BIB_61A0A358F2F8
Type
Article: article from journal or magazin.
Collection
Publications
Title
A regulated two-step mechanism of TBP binding to DNA: a solvent-exposed surface of TBP inhibits TATA box recognition.
Journal
Cell
Author(s)
Zhao X., Herr W.
ISSN
0092-8674[print], 0092-8674[linking]
Publication state
Published
Issued date
2002
Volume
108
Number
5
Pages
615-627
Language
english
Notes
Publication types: Journal Article ; Research Support, U.S. Gov't, P.H.S. Publication Status: ppublish
Abstract
The TATA box binding protein TBP plays a universally important role in eukaryotic nuclear transcription. By mutagenesis, we have discovered a solvent-exposed surface of the structured TBP core domain that is important for inhibition of the DNA binding and DNA-bending activities of full-length wild-type TBP. Full-length wild-type TBP initially binds the TATA box to form an unstable complex containing unbent DNA, and then it slowly forms a stable complex containing bent DNA. TFIIB greatly accelerates formation of a bent TFIIB-TBP-TATA box complex, and the inhibitory DNA binding surface of TBP contributes to the cooperativity of binding to TFIIB. Using TBP and TFIIB, we show that TBP can bind the TATA box through a regulated two-step mechanism, involving a transition from unbent complex to bent complex.
Keywords
DNA/chemistry, DNA/metabolism, DNA-Binding Proteins/chemistry, DNA-Binding Proteins/genetics, Humans, Macromolecular Substances, Models, Genetic, Models, Molecular, Mutation, Nucleic Acid Conformation, Protein Binding, Protein Structure, Tertiary, Recombinant Fusion Proteins/metabolism, TATA Box, TATA-Box Binding Protein, Transcription Factor TFIIB, Transcription Factors/chemistry, Transcription Factors/genetics, Transcription, Genetic
Pubmed
Web of science
Open Access
Yes
Create date
24/01/2008 16:36
Last modification date
20/08/2019 15:18
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