Prediction of structurally conserved regions of D-specific hydroxy acid dehydrogenases by multiple alignment with formate dehydrogenase

Details

Serval ID
serval:BIB_25BCF9AAD695
Type
Article: article from journal or magazin.
Collection
Publications
Title
Prediction of structurally conserved regions of D-specific hydroxy acid dehydrogenases by multiple alignment with formate dehydrogenase
Journal
Biochemical and Biophysical Research Communications
Author(s)
Vinals  C., Depiereux  E., Feytmans  E.
ISSN
0006-291X (Print)
Publication state
Published
Issued date
04/1993
Volume
192
Number
1
Pages
182-8
Notes
Journal Article --- Old month value: Apr 15
Abstract
We propose a multiple alignment of the sequence of formate dehydrogenase with the D-specific 2-hydroxy acid dehydrogenases family. Structurally conserved regions are predicted for those sequences corresponding to important regions of the catalytic and the coenzyme binding domains defined from the known three-dimensional structure of the formate dehydrogenase, namely the nicotinamide binding site (beta D to beta F) and the beta A-loop-alpha B region containing the typical glycine pattern of the adenosine binding site, the catalytic histidine/aspartic acid pair and an arginine probably involved in the interaction with the carboxyl group of the substrate.
Keywords
Alcohol Oxidoreductases/*chemistry/metabolism Amino Acid Sequence Catalysis *Conserved Sequence Formate Dehydrogenases/*chemistry/metabolism *L-Lactate Dehydrogenase *Lactate Dehydrogenases Molecular Sequence Data Sequence Alignment
Pubmed
Web of science
Create date
28/01/2008 11:03
Last modification date
20/08/2019 13:04
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