PARP-1 expression in the mouse is controlled by an autoregulatory loop: PARP-1 binding to an upstream S/MAR element and to a novel recognition motif in its promoter suppresses transcription.

Details

Serval ID
serval:BIB_0A8159EF268B
Type
Article: article from journal or magazin.
Collection
Publications
Title
PARP-1 expression in the mouse is controlled by an autoregulatory loop: PARP-1 binding to an upstream S/MAR element and to a novel recognition motif in its promoter suppresses transcription.
Journal
Journal of Molecular Biology
Author(s)
Vidaković M., Gluch A., Qiao J., Oumard A., Frisch M., Poznanović G., Bode J.
ISSN
1089-8638[electronic], 0022-2836[linking]
Publication state
Published
Issued date
2009
Volume
388
Number
4
Pages
730-750
Language
english
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Abstract
This work identifies central components of a feedback mechanism for the expression of mouse poly(ADP-ribose) polymerase-1 (PARP-1). Using the stress-induced duplex destabilization algorithm, multiple base-unpairing regions (BURs) could be localized in the 5' region of the mouse PARP-1 gene (muPARP-1). Some of these could be identified as scaffold/matrix-attachment regions (S/MARs), suggesting an S/MAR-mediated transcriptional regulation. PARP-1 binding to the most proximal element, S/MAR 1, and to three consensus motifs, AGGCC, in its own promoter (basepairs -956 to +100), could be traced by electrophoretic mobility-shift assay. The AGGCC-complementary GGCCT motif was detected by cis-diammine-dichloro platinum cross-linking and functionally characterized by the effects of site-directed mutagenesis on its performance in wild type (PARP-1(+/+)) and PARP-1 knockout cells (PARP-1(-/-)). Mutation of the central AGGCC tract at basepairs -554 to -550 prevented PARP-1/promoter interactions, whereby muPARP-1 expression became up-regulated. Transfection of a series of reporter gene constructs with or without S/MAR 1 (basepairs -1523 to -1007) and the more distant S/MAR 2 (basepairs -8373 to -6880), into PARP-1(+/+) as well as PARP-1(-/-) cells, revealed an additional, major level of muPARP-1 promoter down-regulation, triggered by PARP-1 binding to S/MAR 1. We conclude that S/MAR 1 represents an upstream control element that acts in conjunction with the muPARP-1 promoter. These interactions are part of a negative autoregulatory loop.
Keywords
Animals, Base Sequence, Binding Sites, Cells, Cultured, Cross-Linking Reagents/chemistry, DNA/chemistry, DNA/genetics, DNA Damage, Fibroblasts/cytology, Fibroblasts/physiology, Formaldehyde/chemistry, Gene Expression Regulation, Genes, Reporter, Humans, Mice, Mice, Knockout, Molecular Sequence Data, Poly(ADP-ribose) Polymerases/genetics, Poly(ADP-ribose) Polymerases/metabolism, Promoter Regions, Genetic, Protein Binding, Regulatory Sequences, Nucleic Acid, Transcription, Genetic
Pubmed
Create date
16/06/2010 12:13
Last modification date
20/08/2019 13:32
Usage data