Transcriptional organization and dynamic expression of the hbpCAD genes, which encode the first three enzymes for 2-hydroxybiphenyl degradation in Pseudomonas azelaica HBP1.
Détails
ID Serval
serval:BIB_EA95DD5C1BCF
Type
Article: article d'un périodique ou d'un magazine.
Collection
Publications
Institution
Titre
Transcriptional organization and dynamic expression of the hbpCAD genes, which encode the first three enzymes for 2-hydroxybiphenyl degradation in Pseudomonas azelaica HBP1.
Périodique
Journal of bacteriology
ISSN
0021-9193 (Print)
ISSN-L
0021-9193
Statut éditorial
Publié
Date de publication
01/2001
Peer-reviewed
Oui
Volume
183
Numéro
1
Pages
270-279
Langue
anglais
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Publication Status: ppublish
Résumé
Pseudomonas azelaica HBP1 degrades the toxic substance 2-hydroxybiphenyl (2-HBP) by means of three enzymes that are encoded by structural genes hbpC, hbpA, and hbpD. These three genes form a small noncontiguous cluster. Their expression is activated by the product of regulatory gene hbpR, which is located directly upstream of the hbpCAD genes. The HbpR protein is a transcription activator and belongs to the so-called XylR/DmpR subclass within the NtrC family of transcriptional activators. Transcriptional fusions between the different hbp intergenic regions and the luxAB genes of Vibrio harveyi in P. azelaica and in Escherichia coli revealed the existence of two HbpR-regulated promoters; one is located in front of hbpC, and the other one is located in front of hbpD. Northern analysis confirmed that the hbpC and hbpA genes are cotranscribed, whereas the hbpD gene is transcribed separately. No transcripts comprising the entire hbpCAD cluster were detected, indicating that transcription from P(hbpC) is terminated after the hbpA gene. E. coli mutant strains lacking the structural genes for the RNA polymerase sigma(54) subunit or for the integration host factor failed to express bioluminescence from P(hbpC)- and P(hbpD)-luxAB fusions when a functional hbpR gene was provided in trans. This pointed to the active role of sigma(54) and integration host factor in transcriptional activation from these promoters. Primer extension analysis revealed that both P(hbpC) and P(hbpD) contain the typical motifs at position -24 (GG) and -12 (GC) found in sigma(54)-dependent promoters. Analysis of changes in the synthesis of the hbp mRNAs, in activities of the 2-HBP pathway enzymes, and in concentrations of 2-HBP intermediates during the first 4 h after induction of continuously grown P. azelaica cells with 2-HBP demonstrated that the specific transcriptional organization of the hbp genes ensured smooth pathway expression.
Mots-clé
Amino Acid Sequence, Bacterial Proteins/genetics, Bacterial Proteins/metabolism, Base Sequence, Biodegradation, Environmental, Biphenyl Compounds/metabolism, Blotting, Northern, DNA Primers, DNA-Binding Proteins, DNA-Directed RNA Polymerases/genetics, DNA-Directed RNA Polymerases/metabolism, Escherichia coli Proteins, Gene Expression Regulation, Bacterial, Genes, Bacterial, Integration Host Factors, Molecular Sequence Data, Promoter Regions, Genetic/genetics, Pseudomonas/enzymology, Pseudomonas/genetics, Pseudomonas/growth & development, RNA Polymerase Sigma 54, Recombinant Fusion Proteins/genetics, Recombinant Fusion Proteins/metabolism, Sigma Factor/genetics, Sigma Factor/metabolism, Transcription, Genetic, Transcriptional Activation
Pubmed
Web of science
Open Access
Oui
Création de la notice
21/01/2008 13:36
Dernière modification de la notice
20/08/2019 16:12