Inference of natural selection from ancient DNA.

Détails

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Etat: Public
Version: Final published version
Licence: CC BY 4.0
ID Serval
serval:BIB_D2F70344208C
Type
Article: article d'un périodique ou d'un magazine.
Collection
Publications
Institution
Titre
Inference of natural selection from ancient DNA.
Périodique
Evolution letters
Auteur⸱e⸱s
Dehasque M., Ávila-Arcos M.C., Díez-Del-Molino D., Fumagalli M., Guschanski K., Lorenzen E.D., Malaspinas A.S., Marques-Bonet T., Martin M.D., Murray GGR, Papadopulos AST, Therkildsen N.O., Wegmann D., Dalén L., Foote A.D.
ISSN
2056-3744 (Electronic)
ISSN-L
2056-3744
Statut éditorial
Publié
Date de publication
04/2020
Peer-reviewed
Oui
Volume
4
Numéro
2
Pages
94-108
Langue
anglais
Notes
Publication types: Journal Article
Publication Status: epublish
Résumé
Evolutionary processes, including selection, can be indirectly inferred based on patterns of genomic variation among contemporary populations or species. However, this often requires unrealistic assumptions of ancestral demography and selective regimes. Sequencing ancient DNA from temporally spaced samples can inform about past selection processes, as time series data allow direct quantification of population parameters collected before, during, and after genetic changes driven by selection. In this Comment and Opinion, we advocate for the inclusion of temporal sampling and the generation of paleogenomic datasets in evolutionary biology, and highlight some of the recent advances that have yet to be broadly applied by evolutionary biologists. In doing so, we consider the expected signatures of balancing, purifying, and positive selection in time series data, and detail how this can advance our understanding of the chronology and tempo of genomic change driven by selection. However, we also recognize the limitations of such data, which can suffer from postmortem damage, fragmentation, low coverage, and typically low sample size. We therefore highlight the many assumptions and considerations associated with analyzing paleogenomic data and the assumptions associated with analytical methods.
Mots-clé
Adaptation, ancient DNA, natural selection, paleogenomics, time series
Pubmed
Web of science
Open Access
Oui
Création de la notice
27/05/2020 12:44
Dernière modification de la notice
15/01/2021 8:12
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