Global analysis of suppressor mutations that rescue human genetic defects.

Détails

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Etat: Public
Version: Final published version
Licence: CC BY 4.0
ID Serval
serval:BIB_7E0928230246
Type
Article: article d'un périodique ou d'un magazine.
Collection
Publications
Institution
Titre
Global analysis of suppressor mutations that rescue human genetic defects.
Périodique
Genome Medicine
Auteur⸱e⸱s
Ünlü B., Pons C., Ho U.L., Batté A., Aloy P., van Leeuwen J.
ISSN
1756-994X (Electronic)
ISSN-L
1756-994X
Statut éditorial
Publié
Date de publication
12/10/2023
Peer-reviewed
Oui
Volume
15
Numéro
1
Pages
78
Langue
anglais
Notes
Publication types: Journal Article
Publication Status: epublish
Résumé
Genetic suppression occurs when the deleterious effects of a primary "query" mutation, such as a disease-causing mutation, are rescued by a suppressor mutation elsewhere in the genome. To capture existing knowledge on suppression relationships between human genes, we examined 2,400 published papers for potential interactions identified through either genetic modification of cultured human cells or through association studies in patients. The resulting network encompassed 476 unique suppression interactions covering a wide spectrum of diseases and biological functions. The interactions frequently linked genes that operate in the same biological process. Suppressors were strongly enriched for genes with a role in stress response or signaling, suggesting that deleterious mutations can often be buffered by modulating signaling cascades or immune responses. Suppressor mutations tended to be deleterious when they occurred in absence of the query mutation, in apparent contrast with their protective role in the presence of the query. We formulated and quantified mechanisms of genetic suppression that could explain 71% of interactions and provided mechanistic insight into disease pathology. Finally, we used these observations to predict suppressor genes in the human genome. The global suppression network allowed us to define principles of genetic suppression that were conserved across diseases, model systems, and species. The emerging frequency of suppression interactions among human genes and range of underlying mechanisms, together with the prevalence of suppression in model organisms, suggest that compensatory mutations may exist for most genetic diseases.
Pubmed
Open Access
Oui
Création de la notice
13/03/2023 18:09
Dernière modification de la notice
16/11/2023 8:25
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