A Gene Ontology Tutorial in Python.

Vesztrocy, A.W.; Dessimoz, C.

doi:10.1007/978-1-4939-3743-1_16

A Gene Ontology Tutorial in Python.

Détails

Télécharger: 978-1-4939-3743-1_16.pdf (218.03 [Ko])
Etat: Public
Version: Final published version

ID Serval

serval:BIB_6D82D9E2A2D4

Type

Article: article d'un périodique ou d'un magazine.

Collection

Publications

Institution

UNIL/CHUV

Titre

A Gene Ontology Tutorial in Python.

Périodique

Methods in molecular biology

Auteur⸱e⸱s

Vesztrocy A.W., Dessimoz C.

ISSN

1940-6029 (Electronic)

ISSN-L

1064-3745

Statut éditorial

Publié

Date de publication

2017

Peer-reviewed

Oui

Volume

1446

Pages

221-229

Langue

anglais

Notes

Publication types: Journal Article
Publication Status: ppublish

Résumé

This chapter is a tutorial on using Gene Ontology resources in the Python programming language. This entails querying the Gene Ontology graph, retrieving Gene Ontology annotations, performing gene enrichment analyses, and computing basic semantic similarity between GO terms. An interactive version of the tutorial, including solutions, is available at http://gohandbook.org .

Mots-clé

Animals, Gene Ontology, Humans, Internet, Molecular Sequence Annotation/methods, Semantics, Software, Python, Tutorial

URN

urn:nbn:ch:serval-BIB_6D82D9E2A2D42

OAI-PMH

oai:serval.unil.ch:BIB_6D82D9E2A2D4

DOI

10.1007/978-1-4939-3743-1_16

Pubmed

27812946

Open Access

Oui