Toward a Novel Multilocus Phylogenetic Taxonomy for the Dermatophytes.

Détails

Ressource 1Télécharger: s11046-016-0073-9.pdf (853.87 [Ko])
Etat: Public
Version: Final published version
ID Serval
serval:BIB_6413D3002CC1
Type
Article: article d'un périodique ou d'un magazine.
Sous-type
Synthèse (review): revue aussi complète que possible des connaissances sur un sujet, rédigée à partir de l'analyse exhaustive des travaux publiés.
Collection
Publications
Institution
Titre
Toward a Novel Multilocus Phylogenetic Taxonomy for the Dermatophytes.
Périodique
Mycopathologia
Auteur⸱e⸱s
de Hoog G.S., Dukik K., Monod M., Packeu A., Stubbe D., Hendrickx M., Kupsch C., Stielow J.B., Freeke J., Göker M., Rezaei-Matehkolaei A., Mirhendi H., Gräser Y.
ISSN
1573-0832 (Electronic)
ISSN-L
0301-486X
Statut éditorial
Publié
Date de publication
02/2017
Peer-reviewed
Oui
Volume
182
Numéro
1-2
Pages
5-31
Langue
anglais
Notes
Publication types: Journal Article
Publication Status: ppublish
Résumé
Type and reference strains of members of the onygenalean family Arthrodermataceae have been sequenced for rDNA ITS and partial LSU, the ribosomal 60S protein, and fragments of β-tubulin and translation elongation factor 3. The resulting phylogenetic trees showed a large degree of correspondence, and topologies matched those of earlier published phylogenies demonstrating that the phylogenetic representation of dermatophytes and dermatophyte-like fungi has reached an acceptable level of stability. All trees showed Trichophyton to be polyphyletic. In the present paper, Trichophyton is restricted to mainly the derived clade, resulting in classification of nearly all anthropophilic dermatophytes in Trichophyton and Epidermophyton, along with some zoophilic species that regularly infect humans. Microsporum is restricted to some species around M. canis, while the geophilic species and zoophilic species that are more remote from the human sphere are divided over Arthroderma, Lophophyton and Nannizzia. A new genus Guarromyces is proposed for Keratinomyces ceretanicus. Thirteen new combinations are proposed; in an overview of all described species it is noted that the largest number of novelties was introduced during the decades 1920-1940, when morphological characters were used in addition to clinical features. Species are neo- or epi-typified where necessary, which was the case in Arthroderma curreyi, Epidermophyton floccosum, Lophophyton gallinae, Trichophyton equinum, T. mentagrophytes, T. quinckeanum, T. schoenleinii, T. soudanense, and T. verrucosum. In the newly proposed taxonomy, Trichophyton contains 16 species, Epidermophyton one species, Nannizzia 9 species, Microsporum 3 species, Lophophyton 1 species, Arthroderma 21 species and Ctenomyces 1 species, but more detailed studies remain needed to establish species borderlines. Each species now has a single valid name. Two new genera are introduced: Guarromyces and Paraphyton. The number of genera has increased, but species that are relevant to routine diagnostics now belong to smaller groups, which enhances their identification.

Mots-clé
Animals, Cluster Analysis, DNA, Fungal/chemistry, DNA, Fungal/genetics, DNA, Ribosomal/chemistry, DNA, Ribosomal/genetics, DNA, Ribosomal Spacer/chemistry, DNA, Ribosomal Spacer/genetics, Epidermophyton/classification, Epidermophyton/genetics, Genetic Variation, Humans, Microsporum/classification, Microsporum/genetics, Peptide Elongation Factors/genetics, Phylogeny, Ribosomal Proteins/genetics, Sequence Analysis, DNA, Tinea/microbiology, Trichophyton/classification, Trichophyton/genetics, Tubulin/genetics
Pubmed
Web of science
Open Access
Oui
Création de la notice
01/11/2016 19:27
Dernière modification de la notice
20/08/2019 15:20
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