SwissSidechain: a molecular and structural database of non-natural sidechains.

Détails

Ressource 1Télécharger: BIB_1D528EF3931C.P001.pdf (3657.09 [Ko])
Etat: Public
Version: de l'auteur⸱e
ID Serval
serval:BIB_1D528EF3931C
Type
Article: article d'un périodique ou d'un magazine.
Sous-type
Synthèse (review): revue aussi complète que possible des connaissances sur un sujet, rédigée à partir de l'analyse exhaustive des travaux publiés.
Collection
Publications
Institution
Titre
SwissSidechain: a molecular and structural database of non-natural sidechains.
Périodique
Nucleic Acids Research
Auteur⸱e⸱s
Gfeller D., Michielin O., Zoete V.
ISSN
1362-4962 (Electronic)
ISSN-L
0305-1048
Statut éditorial
Publié
Date de publication
2013
Peer-reviewed
Oui
Volume
41
Numéro
D1
Pages
D327-D332
Langue
anglais
Notes
Publication types: Journal Article
Article type changed to Review - Bibliomics - Alexandre Pinault
Résumé
Amino acids form the building blocks of all proteins. Naturally occurring amino acids are restricted to a few tens of sidechains, even when considering post-translational modifications and rare amino acids such as selenocysteine and pyrrolysine. However, the potential chemical diversity of amino acid sidechains is nearly infinite. Exploiting this diversity by using non-natural sidechains to expand the building blocks of proteins and peptides has recently found widespread applications in biochemistry, protein engineering and drug design. Despite these applications, there is currently no unified online bioinformatics resource for non-natural sidechains. With the SwissSidechain database (http://www.swisssidechain.ch), we offer a central and curated platform about non-natural sidechains for researchers in biochemistry, medicinal chemistry, protein engineering and molecular modeling. SwissSidechain provides biophysical, structural and molecular data for hundreds of commercially available non-natural amino acid sidechains, both in l- and d-configurations. The database can be easily browsed by sidechain names, families or physico-chemical properties. We also provide plugins to seamlessly insert non-natural sidechains into peptides and proteins using molecular visualization software, as well as topologies and parameters compatible with molecular mechanics software.
Pubmed
Web of science
Open Access
Oui
Création de la notice
14/01/2013 16:02
Dernière modification de la notice
20/08/2019 12:53
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