The eukaryotic promoter database (EPD).

Détails

ID Serval
serval:BIB_16734
Type
Article: article d'un périodique ou d'un magazine.
Collection
Publications
Institution
Titre
The eukaryotic promoter database (EPD).
Périodique
Nucleic acids research
Auteur⸱e⸱s
Périer R.C., Praz V., Junier T., Bonnard C., Bucher P.
ISSN
0305-1048
Statut éditorial
Publié
Date de publication
2000
Volume
28
Numéro
1
Pages
302-3
Langue
anglais
Notes
Publication types: Journal Article ; Research Support, Non-U.S. Gov't - Publication Status: ppublish
Résumé
The Eukaryotic Promoter Database (EPD) is an annotated non-redundant collection of eukaryotic POL II promoters for which the transcription start site has been determined experimentally. Access to promoter sequences is provided by pointers to positions in nucleotide sequence entries. The annotation part of an entry includes a description of the initiation site mapping data, exhaustive cross-references to the EMBL nucleotide sequence database, SWISS-PROT, TRANSFAC and other databases, as well as bibliographic references. EPD is structured in a way that facilitates dynamic extraction of biologically meaningful promoter subsets for comparative sequence analysis. WWW-based interfaces have been developed that enable the user to view EPD entries in different formats, to select and extract promoter sequences according to a variety of criteria, and to navigate to related databases exploiting different cross-references. The EPD web site also features yearly updated base frequency matrices for major eukaryotic promoter elements. EPD can be accessed at http://www.epd.isb-sib.ch
Mots-clé
Database Management Systems, Databases, Factual, Eukaryotic Cells, Internet, Promoter Regions, Genetic, User-Computer Interface
Pubmed
Web of science
Open Access
Oui
Création de la notice
19/11/2007 10:38
Dernière modification de la notice
20/08/2019 13:46
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