Evaluating Synthetic Data Augmentation to Correct for Data Imbalance in Realistic Clinical Prediction Settings

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Version: Final published version
License: CC BY-NC 4.0
Serval ID
serval:BIB_F4F5679ACFD4
Type
A part of a book
Publication sub-type
Chapter: chapter ou part
Collection
Publications
Institution
Title
Evaluating Synthetic Data Augmentation to Correct for Data Imbalance in Realistic Clinical Prediction Settings
Title of the book
Digital Health and Informatics Innovations for Sustainable Health Care Systems
Author(s)
Wahler Nina, Kaabachi Bayrem, Kulynych Bogdan, Despraz Jérémie, Simon Christian, Raisaro Jean Louis
Publisher
IOS Press
ISBN
9781643685335
ISSN
0926-9630
1879-8365
ISSN-L
0926-9630
Publication state
Published
Issued date
22/08/2024
Peer-reviewed
Oui
Volume
316
Series
Studies in Health Technology and Informatics
Pages
929-933
Language
english
Abstract
Predictive modeling holds a large potential in clinical decision-making, yet its effectiveness can be hindered by inherent data imbalances in clinical datasets. This study investigates the utility of synthetic data for improving the performance of predictive modeling on realistic small imbalanced clinical datasets. We compared various synthetic data generation methods including Generative Adversarial Networks, Normalizing Flows, and Variational Autoencoders to the standard baselines for correcting for class underrepresentation on four clinical datasets. Although results show improvement in F1 scores in some cases, even over multiple repetitions, we do not obtain statistically significant evidence that synthetic data generation outperforms standard baselines for correcting for class imbalance. This study challenges common beliefs about the efficacy of synthetic data for data augmentation and highlights the importance of evaluating new complex methods against simple baselines.
Pubmed
Open Access
Yes
Create date
30/08/2024 10:16
Last modification date
05/09/2024 9:14
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