Effects of sample size on the performance of species distribution models
Details
Serval ID
serval:BIB_EC6AF69973C7
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Effects of sample size on the performance of species distribution models
Journal
Diversity and Distribution
Working group(s)
NCEAS Species Distribution Modelling Group
ISSN
1366-9516
Publication state
Published
Issued date
2008
Peer-reviewed
Oui
Volume
14
Number
5
Pages
763-773
Language
english
Abstract
A wide range of modelling algorithms is used by ecologists, conservation practitioners, and others to predict species ranges from point locality data. Unfortunately, the amount of data available is limited for many taxa and regions, making it essential to quantify the sensitivity of these algorithms to sample size. This is the first study to address this need by rigorously evaluating a broad suite of algorithms with independent presence-absence data from multiple species and regions. We evaluated predictions from 12 algorithms for 46 species (from six different regions of the world) at three sample sizes (100, 30, and 10 records). We used data from natural history collections to run the models, and evaluated the quality of model predictions with area under the receiver operating characteristic curve (AUC). With decreasing sample size, model accuracy decreased and variability increased across species and between models. Novel modelling methods that incorporate both interactions between predictor variables and complex response shapes (i.e. GBM, MARS-INT, BRUTO) performed better than most methods at large sample sizes but not at the smallest sample sizes. Other algorithms were much less sensitive to sample size, including an algorithm based on maximum entropy (MAXENT) that had among the best predictive power across all sample sizes. Relative to other algorithms, a distance metric algorithm (DOMAIN) and a genetic algorithm (OM-GARP) had intermediate performance at the largest sample size and among the best performance at the lowest sample size. No algorithm predicted consistently well with small sample size (n < 30) and this should encourage highly conservative use of predictions based on small sample size and restrict their use to exploratory modelling.
Keywords
ecological niche model, MAXENT, model comparison, OM-GARP, sample size, species distribution model KeyWords Plus: CLIMATE-CHANGE, LOGISTIC-REGRESSION, POTENTIAL DISTRIBUTIONS, SPATIAL PREDICTION, ENVELOPE MODELS, ABSENCE DATA, BIRD, RICHNESS, ACCURACY, PATTERNS
Web of science
Create date
18/02/2008 7:53
Last modification date
20/08/2019 16:14