A direct experimental test of Ohno's hypothesis.
Details
Serval ID
serval:BIB_DF802F468FC0
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
A direct experimental test of Ohno's hypothesis.
Journal
eLife
ISSN
2050-084X (Electronic)
ISSN-L
2050-084X
Publication state
Published
Issued date
02/04/2025
Peer-reviewed
Oui
Volume
13
Language
english
Notes
Publication types: Journal Article
Publication Status: epublish
Publication Status: epublish
Abstract
Gene duplication drives evolution by providing raw material for proteins with novel functions. An influential hypothesis by Ohno (1970) posits that gene duplication helps genes tolerate new mutations and thus facilitates the evolution of new phenotypes. Competing hypotheses argue that deleterious mutations will usually inactivate gene duplicates too rapidly for Ohno's hypothesis to work. We experimentally tested Ohno's hypothesis by evolving one or exactly two copies of a gene encoding a fluorescent protein in Escherichia coli through several rounds of mutation and selection. We analyzed the genotypic and phenotypic evolutionary dynamics of the evolving populations through high-throughput DNA sequencing, biochemical assays, and engineering of selected variants. In support of Ohno's hypothesis, populations carrying two gene copies displayed higher mutational robustness than those carrying a single gene copy. Consequently, the double-copy populations experienced relaxed purifying selection, evolved higher phenotypic and genetic diversity, carried more mutations and accumulated combinations of key beneficial mutations earlier. However, their phenotypic evolution was not accelerated, possibly because one gene copy rapidly became inactivated by deleterious mutations. Our work provides an experimental platform to test models of evolution by gene duplication, and it supports alternatives to Ohno's hypothesis that point to the importance of gene dosage.
Keywords
Escherichia coli/genetics, Gene Duplication, Selection, Genetic, Mutation, Evolution, Molecular, Phenotype, High-Throughput Nucleotide Sequencing, Genotype, Directed Molecular Evolution, Genetic Variation, E. coli, directed evolution, evolutionary biology, experimental evolution, gene duplication, mutational robustness, phenotypic diversity
Pubmed
Open Access
Yes
Create date
04/04/2025 9:34
Last modification date
05/04/2025 7:03