Automated DNA extraction using the QIAsymphony platform: Estimation of DNA recovery from simulated forensic stains
Details
Serval ID
serval:BIB_9FED2DDBA6C4
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Automated DNA extraction using the QIAsymphony platform: Estimation of DNA recovery from simulated forensic stains
Journal
Forensic Science International: Genetics Supplement Series
ISSN
1875-1768
Publication state
Published
Issued date
2009
Peer-reviewed
Oui
Volume
2
Number
1
Pages
85-86
Language
english
Abstract
The aim of this study was to evaluate the forensic protocol recently developed by Qiagen for the
QIAsymphony automated DNA extraction platform. Samples containing low amounts of DNA were
specifically considered, since they represent the majority of samples processed in our laboratory. The
analysis of simulated blood and saliva traces showed that the highest DNA yields were obtained with the
maximal elution volume available for the forensic protocol, that is 200 ml. Resulting DNA extracts were
too diluted for successful DNA profiling and required a concentration. This additional step is time
consuming and potentially increases inversion and contamination risks. The 200 ml DNA extracts were
concentrated to 25 ml, and the DNA recovery estimated with real-time PCR as well as with the
percentage of SGM Plus alleles detected. Results using our manual protocol, based on the QIAamp DNA
mini kit, and the automated protocol were comparable. Further tests will be conducted to determine
more precisely DNA recovery, contamination risk and PCR inhibitors removal, once a definitive
procedure, allowing the concentration of DNA extracts from low yield samples, will be available for the
QIAsymphony.
QIAsymphony automated DNA extraction platform. Samples containing low amounts of DNA were
specifically considered, since they represent the majority of samples processed in our laboratory. The
analysis of simulated blood and saliva traces showed that the highest DNA yields were obtained with the
maximal elution volume available for the forensic protocol, that is 200 ml. Resulting DNA extracts were
too diluted for successful DNA profiling and required a concentration. This additional step is time
consuming and potentially increases inversion and contamination risks. The 200 ml DNA extracts were
concentrated to 25 ml, and the DNA recovery estimated with real-time PCR as well as with the
percentage of SGM Plus alleles detected. Results using our manual protocol, based on the QIAamp DNA
mini kit, and the automated protocol were comparable. Further tests will be conducted to determine
more precisely DNA recovery, contamination risk and PCR inhibitors removal, once a definitive
procedure, allowing the concentration of DNA extracts from low yield samples, will be available for the
QIAsymphony.
Keywords
automation , robotics : DNA extraction , STR , Real time PCR
Create date
04/02/2010 12:23
Last modification date
20/08/2019 15:06