Application of real-time PCR for total airborne bacterial assessment : comparison with epifluorescence microscopy and culture-dependent methods

Details

Serval ID
serval:BIB_85CB42B89FF9
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Application of real-time PCR for total airborne bacterial assessment : comparison with epifluorescence microscopy and culture-dependent methods
Journal
Atmospheric Environment
Author(s)
Rinsoz Thomas, Duquenne Philippe, Greff-Mirguet Guylaine, Oppliger Anne
ISSN
1352-2310
Publication state
Published
Issued date
2008
Peer-reviewed
Oui
Volume
42
Number
28
Pages
6767-6774
Language
english
Notes
SAPHIRID:69907
Abstract
Traditional culture-dependent methods to quantify and identify airborne microorganisms are limited by factors such as short-duration sampling times and inability to count nonculturableor non-viable bacteria. Consequently, the quantitative assessment of bioaerosols is often underestimated. Use of the real-time quantitative polymerase chain reaction (Q-PCR) to quantify bacteria in environmental samples presents an alternative method, which should overcome this problem. The aim of this study was to evaluate the performance of a real-time Q-PCR assay as a simple and reliable way to quantify the airborne bacterial load within poultry houses and sewage treatment plants, in comparison with epifluorescencemicroscopy and culture-dependent methods. The estimates of bacterial load that we obtained from real-time PCR and epifluorescence methods, are comparable, however, our analysis of sewage treatment plants indicate these methods give values 270-290 fold greater than those obtained by the ''impaction on nutrient agar'' method. The culture-dependent method of air impaction on nutrient agar was also inadequate in poultry houses, as was the impinger-culture method, which gave a bacterial load estimate 32-fold lower than obtained by Q-PCR. Real-time quantitative PCR thus proves to be a reliable, discerning, and simple method that could be used to estimate airborne bacterial load in a broad variety of other environments expected to carry high numbers of airborne bacteria. [Authors]
Keywords
Aerosols , Air Pollutants, Occupational , Air Microbiology , Bacteria , Polymerase Chain Reaction , Occupational Health
Web of science
Create date
23/02/2009 16:53
Last modification date
20/08/2019 15:45
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