MyHits: improvements to an interactive resource for analyzing protein sequences.

Pagni, M.; Ioannidis, V.; Cerutti, L.; Zahn-Zabal, M.; Jongeneel, C.V.; Hau, J.; Martin, O.; Kuznetsov, D.; Falquet, L.

doi:10.1093/nar/gkm352

MyHits: improvements to an interactive resource for analyzing protein sequences.

Details

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Serval ID

serval:BIB_736C129DDB80

Type

Article: article from journal or magazin.

Collection

Publications

Institution

UNIL/CHUV

Title

MyHits: improvements to an interactive resource for analyzing protein sequences.

Journal

Nucleic Acids Research

Author(s)

Pagni M., Ioannidis V., Cerutti L., Zahn-Zabal M., Jongeneel C.V., Hau J., Martin O., Kuznetsov D., Falquet L.

ISSN

1362-4962[electronic], 0305-1048[linking]

Publication state

Published

Issued date

2007

Peer-reviewed

Oui

Volume

Number

Web Server issue

Pages

W433-W437

Language

english

Abstract

The MyHits web site (http://myhits.isb-sib.ch) is an integrated service dedicated to the analysis of protein sequences. Since its first description in 2004, both the user interface and the back end of the server were improved. A number of tools (e.g. MAFFT, Jacop, Dotlet, Jalview, ESTScan) were added or updated to improve the usability of the service. The MySQL schema and its associated API were revamped and the database engine (HitKeeper) was separated from the web interface. This paper summarizes the current status of the server, with an emphasis on the new services.

Keywords

Computational Biology/methods, Computer Graphics, Databases, Protein, Internet, Programming Languages, Protein Structure, Tertiary, Sequence Alignment, Sequence Analysis, Protein, Software, Systems Integration, User-Computer Interface

OAI-PMH

oai:serval.unil.ch:BIB_736C129DDB80

DOI

10.1093/nar/gkm352

Pubmed

17545200

Web of science

000255311500082

Open Access

Yes

Create date

24/01/2008 16:39