The connectome mapper: an open-source processing pipeline to map connectomes with MRI.

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State: Public
Version: Final published version
Serval ID
serval:BIB_443F7F1F78E7
Type
Article: article from journal or magazin.
Collection
Publications
Title
The connectome mapper: an open-source processing pipeline to map connectomes with MRI.
Journal
Plos One
Author(s)
Daducci A., Gerhard S., Griffa A., Lemkaddem A., Cammoun L., Gigandet X., Meuli R., Hagmann P., Thiran J.P.
ISSN
1932-6203 (Electronic)
ISSN-L
1932-6203
Publication state
Published
Issued date
2012
Peer-reviewed
Oui
Volume
7
Number
12
Pages
e48121
Language
english
Notes
Publication types: Journal Article
Abstract
Researchers working in the field of global connectivity analysis using diffusion magnetic resonance imaging (MRI) can count on a wide selection of software packages for processing their data, with methods ranging from the reconstruction of the local intra-voxel axonal structure to the estimation of the trajectories of the underlying fibre tracts. However, each package is generally task-specific and uses its own conventions and file formats. In this article we present the Connectome Mapper, a software pipeline aimed at helping researchers through the tedious process of organising, processing and analysing diffusion MRI data to perform global brain connectivity analyses. Our pipeline is written in Python and is freely available as open-source at www.cmtk.org.
Pubmed
Web of science
Open Access
Yes
Create date
26/12/2012 15:32
Last modification date
20/08/2019 13:48
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