Primary and quaternary structure of the catabolic ornithine carbamoyltransferase from Pseudomonas aeruginosa. Extensive sequence homology with the anabolic ornithine carbamoyltransferases of Escherichia coli.
Details
Serval ID
serval:BIB_22EB0E0EB52C
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Primary and quaternary structure of the catabolic ornithine carbamoyltransferase from Pseudomonas aeruginosa. Extensive sequence homology with the anabolic ornithine carbamoyltransferases of Escherichia coli.
Journal
European Journal of Biochemistry
ISSN
0014-2956 (Print)
ISSN-L
0014-2956
Publication state
Published
Issued date
1987
Volume
166
Number
1
Pages
111-117
Language
english
Abstract
We have determined the complete nucleotide sequence of the arcB gene from Pseudomonas aeruginosa strain PAO and we have purified the arcB product, the catabolic ornithine carbamoyltransferase (EC 2.1.3.3), to apparent homogeneity from the same strain. The N-terminal amino acid sequence, the total amino acid composition and the subunit size of the purified enzyme were in agreement with nucleotide sequencing results, which predict a polypeptide of 336 amino acids (Mr 38,108). Crosslinking experiments suggest that the native enzyme (apparent Mr approx. 420,000) basically consists of a trimer aggregating to form nonamers or dodecamers. The arcB gene of P. aeruginosa had strong homology with the argF and argI genes which code for the anabolic ornithine carbamoyltransferase isoenzymes in Escherichia coli; 63% of the nucleotides and 57% of the amino acids were absolutely conserved in arcB and argF. This indicates a close evolutionary relationship between these genes although their products have different physiological functions in the cell. Under conditions of induction (energy depletion) the catabolic ornithine carbamoyltransferase represented greater than or equal to 10% of the total cellular protein. Like other highly expressed Pseudomonas genes, the arcB gene was found not to use seven codons which correspond to minor or weakly interacting tRNA species in E. coli.
Keywords
Amino Acid Sequence, Amino Acids/analysis, Base Sequence, Biological Evolution, Cloning, Molecular, Electrophoresis, Polyacrylamide Gel, Escherichia coli/enzymology, Escherichia coli/genetics, Genes, Macromolecular Substances, Ornithine Carbamoyltransferase/genetics, Pseudomonas aeruginosa/enzymology, Pseudomonas aeruginosa/genetics, Sequence Homology, Nucleic Acid
Pubmed
Web of science
Create date
25/01/2008 17:01
Last modification date
20/08/2019 13:00