Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer.
Details
Serval ID
serval:BIB_22A1CCCC429D
Type
Article: article from journal or magazin.
Collection
Publications
Institution
Title
Lineage-dependent gene expression programs influence the immune landscape of colorectal cancer.
Journal
Nature genetics
ISSN
1546-1718 (Electronic)
ISSN-L
1061-4036
Publication state
Published
Issued date
06/2020
Peer-reviewed
Oui
Volume
52
Number
6
Pages
594-603
Language
english
Notes
Publication types: Journal Article ; Multicenter Study ; Research Support, Non-U.S. Gov't
Publication Status: ppublish
Publication Status: ppublish
Abstract
Immunotherapy for metastatic colorectal cancer is effective only for mismatch repair-deficient tumors with high microsatellite instability that demonstrate immune infiltration, suggesting that tumor cells can determine their immune microenvironment. To understand this cross-talk, we analyzed the transcriptome of 91,103 unsorted single cells from 23 Korean and 6 Belgian patients. Cancer cells displayed transcriptional features reminiscent of normal differentiation programs, and genetic alterations that apparently fostered immunosuppressive microenvironments directed by regulatory T cells, myofibroblasts and myeloid cells. Intercellular network reconstruction supported the association between cancer cell signatures and specific stromal or immune cell populations. Our collective view of the cellular landscape and intercellular interactions in colorectal cancer provide mechanistic information for the design of efficient immuno-oncology treatment strategies.
Keywords
Cell Lineage, Colorectal Neoplasms/genetics, Colorectal Neoplasms/immunology, Colorectal Neoplasms/pathology, Gastric Mucosa/immunology, Gastric Mucosa/pathology, Gene Expression Regulation, Neoplastic/immunology, Humans, Sequence Analysis, RNA, Single-Cell Analysis, Stromal Cells/pathology, T-Lymphocytes/immunology, T-Lymphocytes/pathology, Tumor Microenvironment/genetics, Tumor Microenvironment/immunology
Pubmed
Web of science
Create date
10/09/2020 11:09
Last modification date
06/04/2024 6:23